RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.79
SGMS1-211ENST00000626236 RRP12Q5JTH9 1297 aaKnown RBP10.09□□□□□ -0.79
SGMS1-211ENST00000626236 AKNAD1Q5T1N1 836 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 MFSD6Q6ZSS7 791 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 FOXP4Q8IVH2 680 aaPredicted RBP10.09□□□□□ -0.79
SGMS1-211ENST00000626236 SMC1BQ8NDV3 1235 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 STAG1Q8WVM7 1258 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
SGMS1-211ENST00000626236 DNAJC18Q9H819 358 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 TOMM22Q9NS69 142 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 SNX14Q9Y5W7 946 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 TACC3Q9Y6A5 838 aa10.09□□□□□ -0.79
SGMS1-211ENST00000626236 NEDD4P46934 1319 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 TBC1D12O60347 775 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 TOMM70O94826 608 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 ITGBL1O95965 494 aaPredicted RBP10.08□□□□□ -0.8
SGMS1-211ENST00000626236 SHMT1P34896 483 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
SGMS1-211ENST00000626236 STOX1Q6ZVD7 989 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 METTL16Q86W50 562 aaKnown RBP10.08□□□□□ -0.8
SGMS1-211ENST00000626236 RBM46Q8TBY0 533 aaKnown RBP10.08□□□□□ -0.8
SGMS1-211ENST00000626236 KCNB2Q92953 911 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
SGMS1-211ENST00000626236 GREB1LQ9C091 1923 aaPredicted RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 PPP1R12BO60237 982 aaPredicted RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 CELF2O95319 508 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 GDF11O95390 407 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 PCP11498 1178 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 TRDNQ13061 729 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 KRT32Q14532 448 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 CERKLQ49MI3 558 aaPredicted RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 RALYLQ86SE5 291 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 ZNF444Q8N0Y2 327 aaPredicted RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 NCOA7Q8NI08 942 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 JAKMIP1Q96N16 626 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 KRT23Q9C075 422 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 CNNM2Q9H8M5 875 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
SGMS1-211ENST00000626236 ANGEL1Q9UNK9 670 aaKnown RBP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
SGMS1-211ENST00000626236 MYH4Q9Y623 1939 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 TSPY2A6NKD2 308 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 B4E1Z4 1266 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 ORC4O43929 436 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 RANBP6O60518 1105 aaKnown RBP10.06□□□□□ -0.8
SGMS1-211ENST00000626236 KDM4AO75164 1064 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 FGRP09769 529 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 AKR1B1P15121 316 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 RASA1P20936 1047 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
SGMS1-211ENST00000626236 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
SGMS1-211ENST00000626236 ANAPC15P60006 121 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 RRP1BQ14684 758 aaKnown RBP10.06□□□□□ -0.8
SGMS1-211ENST00000626236 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 FAM47AQ5JRC9 791 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 MOB2Q70IA6 237 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 IFNL1Q8IU54 200 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 ESR2Q92731 530 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 TBC1D32Q96NH3 1257 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.06□□□□□ -0.8
SGMS1-211ENST00000626236 PASKQ96RG2 1323 aa10.06□□□□□ -0.8
SGMS1-211ENST00000626236 PHIPQ8WWQ0 1821 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 USP2O75604 605 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 CASTP20810 708 aaKnown RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 PSMA5P28066 241 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 INPP5BP32019 993 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 TFAP4Q01664 338 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 FSTL1Q12841 308 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 ABCB5Q2M3G0 1257 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 ARMC9Q7Z3E5 817 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 MB21D2Q8IYB1 491 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 NKX2-3Q8TAU0 364 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 ZKSCAN4Q969J2 545 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 GBA2Q9HCG7 927 aaPredicted RBP10.05□□□□□ -0.8
SGMS1-211ENST00000626236 ZNF112Q9UJU3 913 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
SGMS1-211ENST00000626236 UBE2Q2LH0YL09 131 aa10.04□□□□□ -0.8
SGMS1-211ENST00000626236 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
SGMS1-211ENST00000626236 GH2P01242 217 aa10.04□□□□□ -0.8
SGMS1-211ENST00000626236 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
SGMS1-211ENST00000626236 CPA1P15085 419 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms