RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
VARS2-213ENST00000625423 CHRNDQ07001 517 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 MORC3Q14149 939 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
VARS2-213ENST00000625423 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 TNKSO95271 1327 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 FANCGO15287 622 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
VARS2-213ENST00000625423 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ACTN4O43707 911 aaKnown RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 MED15Q96RN5 788 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 hCG_1642624A0A1W2PR95 340 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ZNF18P17022 549 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 TBX2Q13207 712 aaPredicted RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
VARS2-213ENST00000625423 MTA3Q9BTC8 594 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
VARS2-213ENST00000625423 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 SEC23AQ15436 765 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 KRT222Q8N1A0 295 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 SAMSN1Q9NSI8 373 aaKnown RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
VARS2-213ENST00000625423 PPP2R2CQ9Y2T4 447 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 ESR2Q92731 530 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 PRDM1O75626 825 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 RCAN1P53805 252 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 ARHGAP29Q52LW3 1261 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 EARS2Q5JPH6 523 aaKnown RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 SPECC1LQ69YQ0 1117 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
VARS2-213ENST00000625423 RNF26Q9BY78 433 aaPredicted RBP12.87□□□□□ -0.35
VARS2-213ENST00000625423 CHD4Q14839 1912 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 NTSR2O95665 410 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 H2AFXP16104 143 aaPredicted RBP12.86□□□□□ -0.35
VARS2-213ENST00000625423 GYG1P46976 350 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 TC2NQ8N9U0 490 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 DHX58Q96C10 678 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 A0A087X0B3 334 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 PKN1Q16512 942 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
VARS2-213ENST00000625423 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 TRIM75PA6NK02 468 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 AFMP43652 599 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
VARS2-213ENST00000625423 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 XBP1P17861 261 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 CASP1P29466 404 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 PLCD1P51178 756 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
VARS2-213ENST00000625423 SPATA20Q8TB22 786 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
VARS2-213ENST00000625423 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
VARS2-213ENST00000625423 STX10O60499 249 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 GABPB1Q06547 395 aaPredicted RBP12.85□□□□□ -0.35
VARS2-213ENST00000625423 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 UBXN4Q92575 508 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
VARS2-213ENST00000625423 WNT7AO00755 349 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 KRT2P35908 639 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 CLCN6P51797 869 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
VARS2-213ENST00000625423 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 RIOK1Q9BRS2 568 aaKnown RBP12.84□□□□□ -0.35
VARS2-213ENST00000625423 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms