RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 VTI1BQ9UEU0 232 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 AP4E1Q9UPM8 1137 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 FER1L4A9Z1Z3 1794 aa5.29□□□□□ -1.56
CDKL5-208ENST00000624953 TTBK1Q5TCY1 1321 aaPredicted RBP5.28□□□□□ -1.56
CDKL5-208ENST00000624953 GREM1O60565 184 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 MED26O95402 600 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 CDK8P49336 464 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 FANCCQ00597 558 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 HNRNPUQ00839 825 aaKnown RBP eCLIP5.28□□□□□ -1.56
CDKL5-208ENST00000624953 MAP7Q14244 749 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 MSMPQ1L6U9 139 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 MCTP1Q6DN14 999 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 PAOXQ6QHF9 649 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 NFXL1Q6ZNB6 911 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 SMYD4Q8IYR2 804 aaPredicted RBP5.28□□□□□ -1.56
CDKL5-208ENST00000624953 SHKBP1Q8TBC3 707 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 PLPPR2Q96GM1 343 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 TMEM74Q96NL1 305 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 GOLGA2P5Q9HBQ8 144 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 METTL5Q9NRN9 209 aaKnown RBP5.28□□□□□ -1.56
CDKL5-208ENST00000624953 TLR6Q9Y2C9 796 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 ARAP3Q8WWN8 1544 aa5.28□□□□□ -1.56
CDKL5-208ENST00000624953 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 USP11P51784 963 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 CAMK2GQ13555 558 aaPredicted RBP5.27□□□□□ -1.57
CDKL5-208ENST00000624953 SEPT6Q14141 434 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 SLBPQ14493 270 aaKnown RBP eCLIP5.27□□□□□ -1.57
CDKL5-208ENST00000624953 CARMIL2Q6F5E8 1435 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 KIF27Q86VH2 1401 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 METTL16Q86W50 562 aaKnown RBP5.27□□□□□ -1.57
CDKL5-208ENST00000624953 YIPF2Q9BWQ6 316 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 BACH2Q9BYV9 841 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 WNT10AQ9GZT5 417 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 CBX8Q9HC52 389 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 MRS2Q9HD23 443 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 PCDHA4Q9UN74 947 aa5.27□□□□□ -1.57
CDKL5-208ENST00000624953 PRNPP04156 253 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 RPL6Q02878 288 aaKnown RBP5.26□□□□□ -1.57
CDKL5-208ENST00000624953 PWP1Q13610 501 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 PPM1JQ5JR12 505 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 OGFOD3Q6PK18 319 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 DTX1Q86Y01 620 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 GATAD2BQ8WXI9 593 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 COPRSQ9NQ92 184 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 PCMTD2Q9NV79 361 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 KBTBD4Q9NVX7 518 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 PCOLCE2Q9UKZ9 415 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 ARHGEF40Q8TER5 1519 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 CARMIL1Q5VZK9 1371 aa5.26□□□□□ -1.57
CDKL5-208ENST00000624953 PREX1Q8TCU6 1659 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 CD109Q6YHK3 1445 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 FAM170BA6NMN3 283 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 DCDC2CA8MYV0 355 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 TGFB1P01137 390 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 PF4P02776 101 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 FOSL1P15407 271 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 RAB6AP20340 208 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 TSNAXIP1Q2TAA8 658 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 TMEM201Q5SNT2 666 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 MFSD14AQ96MC6 490 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 MIR1-1HGQ9H1L0 117 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 KCNF1Q9H3M0 494 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 FBRSQ9HAH7 460 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 U3KQE9 123 aa5.25□□□□□ -1.57
CDKL5-208ENST00000624953 BTBD11A6QL63 1104 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 F13A1P00488 732 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 HCLS1P14317 486 aaPredicted RBP5.24□□□□□ -1.57
CDKL5-208ENST00000624953 NFKBIBQ15653 356 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 WIPI1Q5MNZ9 446 aaPredicted RBP5.24□□□□□ -1.57
CDKL5-208ENST00000624953 BNC2Q6ZN30 1099 aaPredicted RBP5.24□□□□□ -1.57
CDKL5-208ENST00000624953 FAM196AQ6ZSG2 479 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 HDXQ7Z353 690 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 C12orf40Q86WS4 652 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 MRPL41Q8IXM3 137 aaKnown RBP5.24□□□□□ -1.57
CDKL5-208ENST00000624953 DUSP23Q9BVJ7 150 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 ADAMTS1Q9UHI8 967 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 POLR3KQ9Y2Y1 108 aaPredicted RBP5.24□□□□□ -1.57
CDKL5-208ENST00000624953 TTC37Q6PGP7 1564 aa5.24□□□□□ -1.57
CDKL5-208ENST00000624953 LRIG2O94898 1065 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 INTS5Q6P9B9 1019 aaKnown RBP5.23□□□□□ -1.57
CDKL5-208ENST00000624953 FBXL19Q6PCT2 694 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 C22orf34Q6ZV56 151 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 ZNF765Q7L2R6 523 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 KCT2Q8NC54 265 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 ZNF507Q8TCN5 953 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 ACSBG1Q96GR2 724 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 METTL22Q9BUU2 404 aaPredicted RBP5.23□□□□□ -1.57
CDKL5-208ENST00000624953 PIDD1Q9HB75 910 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 MKNK2Q9HBH9 465 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 IGSF5Q9NSI5 407 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 PIM2Q9P1W9 311 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 ADAM30Q9UKF2 790 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 DAGLAQ9Y4D2 1042 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 ROBO2Q9HCK4 1378 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 SPATA31D1Q6ZQQ2 1576 aa5.23□□□□□ -1.57
CDKL5-208ENST00000624953 SAMD9Q5K651 1589 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 RAPGEF2Q9Y4G8 1499 aa5.22□□□□□ -1.57
CDKL5-208ENST00000624953 WDR64B1ANS9 1081 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms