RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RAD17O75943 681 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 SLC9C2Q5TAH2 1124 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 MYSM1Q5VVJ2 828 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 OTUD7BQ6GQQ9 843 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 DRC7Q8IY82 874 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
FAM3A-222ENST00000621967 EIF6P56537 245 aaKnown RBP20.19■□□□□ 0.82
FAM3A-222ENST00000621967 SPTY2D1Q68D10 685 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-222ENST00000621967 DHX40Q8IX18 779 aaKnown RBP20.19■□□□□ 0.82
FAM3A-222ENST00000621967 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 TCRBV5S4A2TA0A5A2 114 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 CPLX1O14810 134 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 MAP3K12Q12852 859 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 LRMPQ12912 555 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 C9orf131Q5VYM1 1079 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 TBC1D10CQ8IV04 446 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 RAI14Q9P0K7 980 aa20.19■□□□□ 0.82
FAM3A-222ENST00000621967 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
FAM3A-222ENST00000621967 NEDD4P46934 1319 aa20.18■□□□□ 0.82
FAM3A-222ENST00000621967 PSME4Q14997 1843 aa20.18■□□□□ 0.82
FAM3A-222ENST00000621967 PRKCSHP14314 528 aaPredicted RBP20.18■□□□□ 0.82
FAM3A-222ENST00000621967 KIF23Q02241 960 aaPredicted RBP20.18■□□□□ 0.82
FAM3A-222ENST00000621967 TRDNQ13061 729 aa20.18■□□□□ 0.82
FAM3A-222ENST00000621967 STK38Q15208 465 aa20.18■□□□□ 0.82
FAM3A-222ENST00000621967 DACT2Q5SW24 774 aa20.18■□□□□ 0.82
FAM3A-222ENST00000621967 SH2B2O14492 632 aaPredicted RBP20.17■□□□□ 0.82
FAM3A-222ENST00000621967 LDHBP07195 334 aaKnown RBP20.17■□□□□ 0.82
FAM3A-222ENST00000621967 PDE6AP16499 860 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 PRDX5P30044 214 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CCDC144BQ3MJ40 725 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CIAPIN1Q6FI81 312 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CCDC144CPQ8IYA2 1237 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 ZNF532Q9HCE3 1301 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 FZD9O00144 591 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 PSMD14O00487 310 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 SPTLC2O15270 562 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 NDUFA8P51970 172 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CXCL9Q07325 125 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
FAM3A-222ENST00000621967 CEP57L1Q8IYX8 460 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 MXD3Q9BW11 206 aa20.17■□□□□ 0.82
FAM3A-222ENST00000621967 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
FAM3A-222ENST00000621967 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
FAM3A-222ENST00000621967 TNIP1Q15025 636 aa20.16■□□□□ 0.82
FAM3A-222ENST00000621967 ALX1Q15699 326 aa20.16■□□□□ 0.82
FAM3A-222ENST00000621967 NKX2-3Q8TAU0 364 aa20.16■□□□□ 0.82
FAM3A-222ENST00000621967 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
FAM3A-222ENST00000621967 MYO3BQ8WXR4 1341 aa20.16■□□□□ 0.82
FAM3A-222ENST00000621967 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 SUGT1Q9Y2Z0 365 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 ZNF646O15015 1829 aaPredicted RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 MAST2Q6P0Q8 1798 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 BECN2A8MW95 431 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 SF3A1Q15459 793 aaKnown RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 ANO1Q5XXA6 986 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 RSBN1LQ6PCB5 846 aaPredicted RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 TMEM87BQ96K49 555 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 STRBPQ96SI9 672 aaKnown RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 NAT10Q9H0A0 1025 aaKnown RBP20.15■□□□□ 0.82
FAM3A-222ENST00000621967 GJB4Q9NTQ9 266 aa20.15■□□□□ 0.82
FAM3A-222ENST00000621967 MYH6P13533 1939 aa20.14■□□□□ 0.82
FAM3A-222ENST00000621967 F8W031 263 aaPredicted RBP20.14■□□□□ 0.81
FAM3A-222ENST00000621967 CDKL5O76039 1030 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
FAM3A-222ENST00000621967 AXDND1Q5T1B0 1012 aaPredicted RBP20.14■□□□□ 0.81
FAM3A-222ENST00000621967 APOA5Q6Q788 366 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 BPIFA3Q9BQP9 254 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 KIAA1468Q9P260 1216 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 ZNF541Q9H0D2 1346 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 NEMFO60524 1076 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 METAP2P50579 478 aaKnown RBP eCLIP20.14■□□□□ 0.815e-7■■□□□ 13.5
FAM3A-222ENST00000621967 MECOMQ03112 1051 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 GRIK5Q16478 980 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 SGMS1Q86VZ5 419 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 KIAA0825Q8IV33 1275 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 SDF4Q9BRK5 362 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 TTF2Q9UNY4 1162 aaKnown RBP20.14■□□□□ 0.81
FAM3A-222ENST00000621967 GJA3Q9Y6H8 435 aa20.14■□□□□ 0.81
FAM3A-222ENST00000621967 A0A087WWV3 80 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 IGSF3O75054 1194 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 CMA1P23946 247 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 LRRC8AQ8IWT6 810 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 ZNF710Q8N1W2 664 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 IGDCC4Q8TDY8 1250 aa20.13■□□□□ 0.81
FAM3A-222ENST00000621967 NSUN4Q96CB9 384 aaKnown RBP20.13■□□□□ 0.81
FAM3A-222ENST00000621967 SLC39A14Q15043 492 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 AOPEPQ8N6M6 819 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
FAM3A-222ENST00000621967 NID2Q14112 1375 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 B4E1Z4 1266 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 RIOK3O14730 519 aaKnown RBP20.12■□□□□ 0.81
FAM3A-222ENST00000621967 APPP05067 770 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 GSTO1P78417 241 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms