RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PHEXP78562 749 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 HDAC1Q13547 482 aaPredicted RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 PSPC1Q8WXF1 523 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DAAM1Q9Y4D1 1078 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 SPTLC2O15270 562 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 TTC22Q5TAA0 569 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC89Q8N998 374 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 DACT3Q96B18 629 aaPredicted RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ARHGEF9O43307 516 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 CREB3O43889 395 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 SKIP12755 728 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 NOP14P78316 857 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 EFHD1Q9BUP0 239 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ACTR5Q9H9F9 607 aaPredicted RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 VAT1LQ9HCJ6 419 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 BAG5Q9UL15 447 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 TPX2Q9ULW0 747 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 ORC6Q9Y5N6 252 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 CUL4BQ13620 913 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 TRIM42Q8IWZ5 723 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 TSR2Q969E8 191 aaKnown RBP7.95□□□□□ -1.14
COLCA1-205ENST00000620864 LZTFL1Q9NQ48 299 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 GIMAP4Q9NUV9 329 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 MKL2Q9ULH7 1088 aa7.95□□□□□ -1.14
COLCA1-205ENST00000620864 IL16Q14005 1332 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 TRIM75PA6NK02 468 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 SYF2O95926 243 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 LMNAP02545 664 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 IQUBQ8NA54 791 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 LEO1Q8WVC0 666 aaPredicted RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 TMX3Q96JJ7 454 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 GFAPP14136 432 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 ASIC1P78348 528 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 TYW1Q9NV66 732 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 ARHGAP42A6NI28 874 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 TTC4O95801 387 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 CXorf38Q8TB03 319 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 GRK7Q8WTQ7 553 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 RBM17Q96I25 401 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 DACT1Q9NYF0 836 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 RBSNQ9H1K0 784 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 DDX21Q9NR30 783 aaKnown RBP eCLIP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 PTGS1P23219 599 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 KIF11P52732 1056 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 MUM1L1Q5H9M0 696 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 BBOF1Q8ND07 529 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 DNAJC25Q9H1X3 360 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 IL1RAPL2Q9NP60 686 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 SERTAD1Q9UHV2 236 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 NSD2O96028 1365 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 SMIM23A6NLE4 172 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 SLC8A3P57103 927 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 PDXDC1Q6P996 788 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 TFIP11Q9UBB9 837 aaKnown RBP7.94□□□□□ -1.14
COLCA1-205ENST00000620864 FRMD4BQ9Y2L6 1034 aa7.94□□□□□ -1.14
COLCA1-205ENST00000620864 ZBTB43O43298 467 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 UQCRFS1P1P0C7P4 283 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 POLA2Q14181 598 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 TPTE2Q6XPS3 522 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 HAUS1Q96CS2 278 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 C6orf50Q9HD87 102 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 NSD3Q9BZ95 1437 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ZFYVE16Q7Z3T8 1539 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 RGS16O15492 202 aaPredicted RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 SUN1O94901 812 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 STX2P32856 288 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 DMTNQ08495 405 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ARHGAP18Q8N392 663 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 LARGE2Q8N3Y3 721 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 AGTPBP1Q9UPW5 1226 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 A0A087WUV0 522 aaPredicted RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 EPB41P11171 864 aaKnown RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ATP6V1E1P36543 226 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 RARSP54136 660 aaKnown RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 DZIP3Q86Y13 1208 aaKnown RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 TMCO5AQ8N6Q1 288 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 CAPS2Q9BXY5 557 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 IFNKQ9P0W0 207 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 EFCAB8A8MWE9 144 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 STX10O60499 249 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 PCYT1AP49585 367 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ZGPATQ8N5A5 531 aaKnown RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ARHGAP45Q92619 1136 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ABCC10Q5T3U5 1492 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 GTPBP6O43824 516 aaPredicted RBP7.93□□□□□ -1.14
COLCA1-205ENST00000620864 PLCD1P51178 756 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 APLP1P51693 650 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 WTAPQ15007 396 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 CNNM4Q6P4Q7 775 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 HEATR3Q7Z4Q2 680 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ESR2Q92731 530 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ALG1Q9BT22 464 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 SLC26A6Q9BXS9 759 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 ANGPTL2Q9UKU9 493 aa7.93□□□□□ -1.14
COLCA1-205ENST00000620864 PRIM1P49642 420 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms