RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
LINC00649-218ENST00000620580 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
LINC00649-218ENST00000620580 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
LINC00649-218ENST00000620580 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
LINC00649-218ENST00000620580 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
LINC00649-218ENST00000620580 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
LINC00649-218ENST00000620580 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
LINC00649-218ENST00000620580 MYH1P12882 1939 aa13.84□□□□□ -0.19
LINC00649-218ENST00000620580 GH2P01242 217 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 CHGBP05060 677 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 HLA-DOAP06340 250 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
LINC00649-218ENST00000620580 CCL5P13501 91 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 PDE6AP16499 860 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 PLCD1P51178 756 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 SLC9C2Q5TAH2 1124 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 P2RX7Q99572 595 aaKnown RBP13.83□□□□□ -0.2
LINC00649-218ENST00000620580 TBC1D2Q9BYX2 928 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 BOLA2Q9H3K6 86 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 PNMA3Q9UL41 463 aa13.83□□□□□ -0.2
LINC00649-218ENST00000620580 LOC285556D6RIA3 1793 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
LINC00649-218ENST00000620580 ADCY3O60266 1144 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00649-218ENST00000620580 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 EMILIN3Q9NT22 766 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 ZNF532Q9HCE3 1301 aa13.82□□□□□ -0.2
LINC00649-218ENST00000620580 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-218ENST00000620580 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00649-218ENST00000620580 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-218ENST00000620580 TATDN1Q6P1N9 297 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 SLAIN1Q8ND83 568 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 SERPINB13Q9UIV8 391 aa13.81□□□□□ -0.2
LINC00649-218ENST00000620580 C19orf81C9J6K1 198 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 INHAP05111 366 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 GJB1P08034 283 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 CYP2D6P10635 497 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 SHMT1P34896 483 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 UBXN2AP68543 259 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
LINC00649-218ENST00000620580 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
LINC00649-218ENST00000620580 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 LCORLQ8N3X6 602 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 ACER1Q8TDN7 264 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 COA7Q96BR5 231 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 TXNRD2Q9NNW7 524 aa13.8□□□□□ -0.2
LINC00649-218ENST00000620580 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 PRKAB2O43741 272 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
LINC00649-218ENST00000620580 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
LINC00649-218ENST00000620580 GJA8P48165 433 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 IRF5Q13568 498 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 Q3C1V9 767 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 CERKLQ49MI3 558 aaPredicted RBP13.79□□□□□ -0.2
LINC00649-218ENST00000620580 TTC6Q86TZ1 520 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 EHD4Q9H223 541 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
LINC00649-218ENST00000620580 ATP5JP18859 108 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 HERVK_113P62684 666 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 GABPAQ06546 454 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 TRIM32Q13049 653 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 ABCB5Q2M3G0 1257 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 U2AF1L4Q8WU68 220 aaKnown RBP13.78□□□□□ -0.2
LINC00649-218ENST00000620580 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
LINC00649-218ENST00000620580 HAUS7Q99871 368 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
LINC00649-218ENST00000620580 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
LINC00649-218ENST00000620580 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
LINC00649-218ENST00000620580 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 MORF4L1Q9UBU8 362 aa13.78□□□□□ -0.2
LINC00649-218ENST00000620580 ADD2P35612 726 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
LINC00649-218ENST00000620580 UBE2Q1Q7Z7E8 422 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 DEFB118Q96PH6 123 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 FEZ1Q99689 392 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 TRIOBPQ9H2D6 2365 aa13.77□□□□□ -0.21
LINC00649-218ENST00000620580 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms