RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MYH6P13533 1939 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 THSD7AQ9UPZ6 1657 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 SBF2Q86WG5 1849 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 ZNF500O60304 480 aaPredicted RBP14.31□□□□□ -0.12
CIITA-212ENST00000618207 U2AF2P26368 475 aaKnown RBP eCLIP14.31□□□□□ -0.12
CIITA-212ENST00000618207 CCDC186Q7Z3E2 898 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 WASF1Q92558 559 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 XDHP47989 1333 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
CIITA-212ENST00000618207 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
CIITA-212ENST00000618207 ST5P78524 1137 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 LRMPQ12912 555 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 IQCB1Q15051 598 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 PTPAQ15257 358 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 NOM1Q5C9Z4 860 aaKnown RBP14.31□□□□□ -0.12
CIITA-212ENST00000618207 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 KIAA1468Q9P260 1216 aa14.31□□□□□ -0.12
CIITA-212ENST00000618207 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
CIITA-212ENST00000618207 KRT27Q7Z3Y8 459 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 KCNF1Q9H3M0 494 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 PYCARDQ9ULZ3 195 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 OFD1O75665 1012 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 TFAP4Q01664 338 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 DDR1Q08345 913 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 PNOCQ13519 176 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 ZNF804AQ7Z570 1209 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 TDRD7Q8NHU6 1098 aaKnown RBP14.3□□□□□ -0.12
CIITA-212ENST00000618207 ZNF831Q5JPB2 1677 aa14.3□□□□□ -0.12
CIITA-212ENST00000618207 CMA1P23946 247 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 ZNF75DP51815 510 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 TROAPQ12815 778 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 EARS2Q5JPH6 523 aaKnown RBP14.29□□□□□ -0.12
CIITA-212ENST00000618207 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 LEMD3Q9Y2U8 911 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 TIAM2Q8IVF5 1701 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 USP17L3A6NCW0 530 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 USP17L4A6NCW7 530 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 FOXN1O15353 648 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 PDE4BQ07343 736 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 SPTY2D1Q68D10 685 aaPredicted RBP14.29□□□□□ -0.12
CIITA-212ENST00000618207 USP17L1Q7RTZ2 530 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 CEP57L1Q8IYX8 460 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 JMYQ8N9B5 988 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
CIITA-212ENST00000618207 PLCD1P51178 756 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 CTCFLQ8NI51 663 aaPredicted RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 WDR66Q8TBY9 1149 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 CD209Q9NNX6 404 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 GGA1Q9UJY5 639 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 COL24A1Q17RW2 1714 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 CCDC88AQ3V6T2 1871 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 PKN1Q16512 942 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 LONRF3Q496Y0 759 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 FILIP1Q7Z7B0 1213 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 DHX40Q8IX18 779 aaKnown RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 PROM2Q8N271 834 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 POLLQ9UGP5 575 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 DUOX1Q9NRD9 1551 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 LY75O60449 1722 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 ONECUT3O60422 494 aaPredicted RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 ARID5BQ14865 1188 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 MFSD14BQ5SR56 506 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 MSL1Q68DK7 614 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 RASGRP2Q7LDG7 609 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 ARPP21Q9UBL0 812 aaPredicted RBP14.28□□□□□ -0.12
CIITA-212ENST00000618207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
CIITA-212ENST00000618207 IRS2Q9Y4H2 1338 aa14.28□□□□□ -0.12
CIITA-212ENST00000618207 RGL2O15211 777 aa14.27□□□□□ -0.12
CIITA-212ENST00000618207 NOLC1Q14978 699 aaKnown RBP eCLIP14.27□□□□□ -0.12
CIITA-212ENST00000618207 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.12
CIITA-212ENST00000618207 WNT7AO00755 349 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 BTDP43251 543 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 GRAMD1CQ8IYS0 662 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 CNNM3Q8NE01 707 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
CIITA-212ENST00000618207 CPVLQ9H3G5 476 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 KCNH3Q9ULD8 1083 aa14.27□□□□□ -0.13
CIITA-212ENST00000618207 PPP6R2O75170 966 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
CIITA-212ENST00000618207 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
CIITA-212ENST00000618207 ADAMTS3O15072 1205 aa14.26□□□□□ -0.13
CIITA-212ENST00000618207 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms