RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 SEMA6BQ9H3T3 888 aa14.8□□□□□ -0.04
COL4A2-210ENST00000617564 C11orf49Q9H6J7 331 aa14.8□□□□□ -0.04
COL4A2-210ENST00000617564 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 FOSL2P15408 326 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 HMGCS2P54868 508 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 GORABQ5T7V8 394 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 TEX11Q8IYF3 940 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 NEUROD6Q96NK8 337 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 SYNGAP1Q96PV0 1343 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 ATAD5Q96QE3 1844 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 NOL10Q9BSC4 688 aaKnown RBP14.79□□□□□ -0.04
COL4A2-210ENST00000617564 MORF4L1Q9UBU8 362 aa14.79□□□□□ -0.04
COL4A2-210ENST00000617564 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 RARSP54136 660 aaKnown RBP14.78□□□□□ -0.04
COL4A2-210ENST00000617564 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 ASCC2Q9H1I8 757 aaPredicted RBP14.78□□□□□ -0.04
COL4A2-210ENST00000617564 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
COL4A2-210ENST00000617564 GINM1Q9NU53 330 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 RAI14Q9P0K7 980 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 DOCK3Q8IZD9 2030 aa14.78□□□□□ -0.04
COL4A2-210ENST00000617564 IGSF3O75054 1194 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 ASNSP08243 561 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 PLCG2P16885 1265 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 PI16Q6UXB8 463 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 TBC1D9Q6ZT07 1266 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 HMX1Q9NP08 348 aaPredicted RBP14.77□□□□□ -0.05
COL4A2-210ENST00000617564 GJD2Q9UKL4 321 aa14.77□□□□□ -0.05
COL4A2-210ENST00000617564 DDX60LQ5H9U9 1706 aaKnown RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 BAG3O95817 575 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 HOXA7P31268 230 aaPredicted RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 MCAMP43121 646 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 BACE1P56817 501 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 IRX3P78415 501 aaPredicted RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 RRP1BQ14684 758 aaKnown RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 GTF3C2Q8WUA4 911 aaPredicted RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 SOCS4Q8WXH5 440 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 SNX27Q96L92 541 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 LRP2BPQ9P2M1 347 aa14.76□□□□□ -0.05
COL4A2-210ENST00000617564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.76□□□□□ -0.05
COL4A2-210ENST00000617564 GNAI2P04899 355 aa14.75□□□□□ -0.05
COL4A2-210ENST00000617564 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A2-210ENST00000617564 MTMR2Q13614 643 aa14.75□□□□□ -0.05
COL4A2-210ENST00000617564 MAP3K21Q5TCX8 1036 aa14.75□□□□□ -0.05
COL4A2-210ENST00000617564 METTL16Q86W50 562 aaKnown RBP14.75□□□□□ -0.05
COL4A2-210ENST00000617564 TRMT44Q8IYL2 757 aaKnown RBP14.75□□□□□ -0.05
COL4A2-210ENST00000617564 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
COL4A2-210ENST00000617564 TRIB2Q92519 343 aa14.75□□□□□ -0.05
COL4A2-210ENST00000617564 SIPA1L1O43166 1804 aa14.75□□□□□ -0.05
COL4A2-210ENST00000617564 PLXNB2O15031 1838 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 C19orf81C9J6K1 198 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 IPO8O15397 1037 aaKnown RBP14.74□□□□□ -0.05
COL4A2-210ENST00000617564 XRCC5P13010 732 aaKnown RBP14.74□□□□□ -0.05
COL4A2-210ENST00000617564 PPP4CP60510 307 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 HERVK_113P62684 666 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 NAA16Q6N069 864 aaPredicted RBP14.74□□□□□ -0.05
COL4A2-210ENST00000617564 NUDT12Q9BQG2 462 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 GPR108Q9NPR9 543 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 OGDHLQ9ULD0 1010 aa14.74□□□□□ -0.05
COL4A2-210ENST00000617564 ARIH1Q9Y4X5 557 aaPredicted RBP14.74□□□□□ -0.05
COL4A2-210ENST00000617564 FLT1P17948 1338 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 PNMA6EA0A0J9YXQ4 647 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 MAPK4P31152 587 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 TRIM32Q13049 653 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 FOXP4Q8IVH2 680 aaPredicted RBP14.73□□□□□ -0.05
COL4A2-210ENST00000617564 GPRC5AQ8NFJ5 357 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
COL4A2-210ENST00000617564 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 DNAJC18Q9H819 358 aa14.73□□□□□ -0.05
COL4A2-210ENST00000617564 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL4A2-210ENST00000617564 PFASO15067 1338 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 USP17L10C9JJH3 530 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 TRIM27P14373 513 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 PDE3AQ14432 1141 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 TTC39AQ5SRH9 613 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 ATF7IPQ6VMQ6 1270 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 CRACR2BQ8N4Y2 399 aaPredicted RBP14.72□□□□□ -0.05
COL4A2-210ENST00000617564 P2RX7Q99572 595 aaKnown RBP14.72□□□□□ -0.05
COL4A2-210ENST00000617564 TTYH1Q9H313 450 aaPredicted RBP14.72□□□□□ -0.05
COL4A2-210ENST00000617564 ZBTB21Q9ULJ3 1066 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 HCN4Q9Y3Q4 1203 aa14.72□□□□□ -0.05
COL4A2-210ENST00000617564 HLA-DOAP06340 250 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
COL4A2-210ENST00000617564 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
COL4A2-210ENST00000617564 CYP2B6P20813 491 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 TNNI3KQ59H18 835 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 CCDC158Q5M9N0 1113 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 MAPKAPK5Q8IW41 473 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 USP38Q8NB14 1042 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
COL4A2-210ENST00000617564 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 TXNRD2Q9NNW7 524 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 FPGT-TNNI3KV9GXZ4 949 aa14.71□□□□□ -0.05
COL4A2-210ENST00000617564 RGS2P41220 211 aa14.7□□□□□ -0.06
COL4A2-210ENST00000617564 ERVK-9P63128 1117 aa14.7□□□□□ -0.06
COL4A2-210ENST00000617564 ERVK-24P63145 666 aa14.7□□□□□ -0.06
COL4A2-210ENST00000617564 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms