RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LARP1BQ659C4 914 aaKnown RBP18.34■□□□□ 0.53
RTN1-209ENST00000611068 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 LEMD3Q9Y2U8 911 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 LAMA4Q16363 1823 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 TRDNQ13061 729 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 GPS2Q13227 327 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 DZIP1Q86YF9 867 aaKnown RBP18.34■□□□□ 0.53
RTN1-209ENST00000611068 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
RTN1-209ENST00000611068 TBC1D16Q8TBP0 767 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 PRDM1O75626 825 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 BBOX1O75936 387 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 DOK7Q18PE1 504 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 MYL10Q9BUA6 226 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 UBXN6Q9BZV1 441 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 SUFUQ9UMX1 484 aa18.33■□□□□ 0.53
RTN1-209ENST00000611068 SASH3O75995 380 aa18.33■□□□□ 0.52
RTN1-209ENST00000611068 RIOK1Q9BRS2 568 aaKnown RBP18.33■□□□□ 0.52
RTN1-209ENST00000611068 CBX8Q9HC52 389 aa18.33■□□□□ 0.52
RTN1-209ENST00000611068 F8W031 263 aaPredicted RBP18.32■□□□□ 0.52
RTN1-209ENST00000611068 LMAN1P49257 510 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 CAMK4Q16566 473 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 ZNF804AQ7Z570 1209 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 CD209Q9NNX6 404 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
RTN1-209ENST00000611068 MAGEA9P43362 315 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 SATB1Q01826 763 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 FOXR1Q6PIV2 292 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 TMCO3Q6UWJ1 677 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 LRRC8AQ8IWT6 810 aa18.32■□□□□ 0.52
RTN1-209ENST00000611068 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
RTN1-209ENST00000611068 SF3B2Q13435 895 aaKnown RBP18.31■□□□□ 0.52
RTN1-209ENST00000611068 CDC37L1Q7L3B6 337 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
RTN1-209ENST00000611068 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 TYRO3Q06418 890 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 C2CD5Q86YS7 1000 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
RTN1-209ENST00000611068 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
RTN1-209ENST00000611068 LDHBP07195 334 aaKnown RBP18.3■□□□□ 0.52
RTN1-209ENST00000611068 GSCP56915 257 aaPredicted RBP18.3■□□□□ 0.52
RTN1-209ENST00000611068 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
RTN1-209ENST00000611068 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 CYP2D6P10635 497 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 SKILP12757 684 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
RTN1-209ENST00000611068 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 ANO6Q4KMQ2 910 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 KLRG2A4D1S0 409 aaPredicted RBP18.29■□□□□ 0.52
RTN1-209ENST00000611068 GTF2IP78347 998 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 NOM1Q5C9Z4 860 aaKnown RBP18.29■□□□□ 0.52
RTN1-209ENST00000611068 CCDC91Q7Z6B0 441 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 CKAP2LQ8IYA6 745 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 KCNQ5Q9NR82 932 aa18.29■□□□□ 0.52
RTN1-209ENST00000611068 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 EIF3CLB5ME19 914 aaKnown RBP18.28■□□□□ 0.52
RTN1-209ENST00000611068 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 USP17L21D6R901 530 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 SEMA3EO15041 775 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 NPR1P16066 1061 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 PDE6BP35913 854 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 PPARAQ07869 468 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 SMC1AQ14683 1233 aaKnown RBP18.28■□□□□ 0.52
RTN1-209ENST00000611068 EIF3CQ99613 913 aaKnown RBP18.28■□□□□ 0.52
RTN1-209ENST00000611068 L2HGDHQ9H9P8 463 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 PFKFB2O60825 505 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 NFXL1Q6ZNB6 911 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 CCAR2Q8N163 923 aaKnown RBP18.28■□□□□ 0.52
RTN1-209ENST00000611068 GJB4Q9NTQ9 266 aa18.28■□□□□ 0.52
RTN1-209ENST00000611068 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.52
RTN1-209ENST00000611068 F13A1P00488 732 aa18.27■□□□□ 0.52
RTN1-209ENST00000611068 ACTN2P35609 894 aa18.27■□□□□ 0.52
RTN1-209ENST00000611068 DNM1Q05193 864 aaKnown RBP18.27■□□□□ 0.52
RTN1-209ENST00000611068 MFSD14BQ5SR56 506 aa18.27■□□□□ 0.52
RTN1-209ENST00000611068 DPP8Q6V1X1 898 aaPredicted RBP18.27■□□□□ 0.52
RTN1-209ENST00000611068 MICU3Q86XE3 530 aa18.27■□□□□ 0.52
RTN1-209ENST00000611068 ADAM21Q9UKJ8 722 aa18.27■□□□□ 0.52
RTN1-209ENST00000611068 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.51
RTN1-209ENST00000611068 TBC1D8O95759 1140 aa18.27■□□□□ 0.51
RTN1-209ENST00000611068 GNAT2P19087 354 aa18.27■□□□□ 0.51
RTN1-209ENST00000611068 OTUD7BQ6GQQ9 843 aa18.27■□□□□ 0.51
RTN1-209ENST00000611068 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.27■□□□□ 0.51
RTN1-209ENST00000611068 SP8Q8IXZ3 490 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms