RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CEMIPQ8WUJ3 1361 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 MED23Q9ULK4 1368 aa8.24□□□□□ -1.09
CSDE1-218ENST00000610726 SMCO2A6NFE2 343 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CETN1Q12798 172 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CUL4AQ13619 759 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 NOSTRINQ8IVI9 506 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 NSUN7Q8NE18 718 aaKnown RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 BICD1Q96G01 975 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 SPAG5Q96R06 1193 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 STRBPQ96SI9 672 aaKnown RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 INCENPQ9NQS7 918 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 PICK1Q9NRD5 415 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 BIN2Q9UBW5 565 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 ATF5Q9Y2D1 282 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CD163L1Q9NR16 1453 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 SPATA31A1Q5TZJ5 1347 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 DEPDC5O75140 1603 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 JCADQ9P266 1359 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 NR1I2O75469 434 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 ADCY7P51828 1080 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 GNG11P61952 73 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 MYL5Q02045 173 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 SNW1Q13573 536 aaKnown RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 DYNLL2Q96FJ2 89 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 OVOS2A0A0G2JMS6 1433 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 RAD17O75943 681 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 RABL6Q3YEC7 729 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CERKLQ49MI3 558 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-218ENST00000610726 NSMFQ6X4W1 530 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 ATG9AQ7Z3C6 839 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CCDC150Q8NCX0 1101 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CTAGE1Q96RT6 745 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 ZSWIM4Q9H7M6 989 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 MROH1Q8NDA8 1641 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 CDHR2Q9BYE9 1310 aa8.23□□□□□ -1.09
CSDE1-218ENST00000610726 USO1O60763 962 aaKnown RBP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CCT6AP40227 531 aaKnown RBP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 NOLC1Q14978 699 aaKnown RBP eCLIP8.22□□□□□ -1.092e-7■□□□□ 10.8
CSDE1-218ENST00000610726 TXNRD1Q16881 649 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CCDC174Q6PII3 467 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CERKQ8TCT0 537 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 FTOQ9C0B1 505 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CASQ1P31415 396 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 PLCD1P51178 756 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ZNF445P59923 1031 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 NFIXQ14938 502 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 SV2BQ7L1I2 683 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 GPT2Q8TD30 523 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 AIFM3Q96NN9 605 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CLIC6Q96NY7 704 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 CBX8Q9HC52 389 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ATP10DQ9P241 1426 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 BACH1O14867 736 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 SCG2P13521 617 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ERCC3P19447 782 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ARID5AQ03989 594 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 INF2Q27J81 1249 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 AXDND1Q5T1B0 1012 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ADALQ6DHV7 355 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 PPLO60437 1756 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 IQSEC2Q5JU85 1478 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 FAM13AO94988 1023 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 PDE4DQ08499 809 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 ITPK1Q13572 414 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 MTERF4Q7Z6M4 381 aaKnown RBP8.22□□□□□ -1.09
CSDE1-218ENST00000610726 LZTS2Q9BRK4 669 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
CSDE1-218ENST00000610726 H7C1D1 291 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 PFKFB1P16118 471 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.09
CSDE1-218ENST00000610726 ICA1Q05084 483 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 VPS72Q15906 364 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 DYMQ7RTS9 669 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 BLIDQ8IZY5 108 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 SPICE1Q8N0Z3 855 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 SNX29Q8TEQ0 813 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 MAP7D2Q96T17 732 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 TCHPQ9BT92 498 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 RIPOR2Q9Y4F9 1068 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 CLIC4Q9Y696 253 aa8.21□□□□□ -1.09
CSDE1-218ENST00000610726 MYCLP12524 364 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-218ENST00000610726 UBXN1Q04323 297 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 GJB4Q9NTQ9 266 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 SERTAD1Q9UHV2 236 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 DDX39AO00148 427 aaKnown RBP8.21□□□□□ -1.1
CSDE1-218ENST00000610726 FAM193AP78312 1265 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 RBM6P78332 1123 aaKnown RBP8.21□□□□□ -1.1
CSDE1-218ENST00000610726 ARHGAP27Q6ZUM4 889 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 VPS16Q9H269 839 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 BLZF1Q9H2G9 400 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 SERPINB13Q9UIV8 391 aa8.21□□□□□ -1.1
CSDE1-218ENST00000610726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.21□□□□□ -1.14e-11■□□□□ 9.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms