RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 A0A0G2JLL6 359 aaPredicted RBP15.36■□□□□ 0.05
CD9-212ENST00000610354 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
CD9-212ENST00000610354 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
CD9-212ENST00000610354 SHMT1P34896 483 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 CAP1Q01518 475 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 NOM1Q5C9Z4 860 aaKnown RBP15.36■□□□□ 0.05
CD9-212ENST00000610354 PRRT2Q7Z6L0 340 aaPredicted RBP15.36■□□□□ 0.05
CD9-212ENST00000610354 TTC6Q86TZ1 520 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 SLC4A4Q9Y6R1 1079 aa15.36■□□□□ 0.05
CD9-212ENST00000610354 GSG1L2A8MUP6 293 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 OTUD7BQ6GQQ9 843 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 ANKRD23Q86SG2 305 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 FSD1Q9BTV5 496 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 OSBPL3Q9H4L5 887 aa15.35■□□□□ 0.05
CD9-212ENST00000610354 TRIM75PA6NK02 468 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 USP17L21D6R901 530 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 GPAA1O43292 621 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 SPP2Q13103 211 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 DGKZQ13574 1117 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
CD9-212ENST00000610354 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 EPB41L4AQ9HCS5 686 aaPredicted RBP15.34■□□□□ 0.05
CD9-212ENST00000610354 ZCCHC17Q9NP64 241 aaKnown RBP15.34■□□□□ 0.05
CD9-212ENST00000610354 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
CD9-212ENST00000610354 MYH8P13535 1937 aa15.33■□□□□ 0.05
CD9-212ENST00000610354 PDHXO00330 501 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 FKTNO75072 461 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 GH2P01242 217 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 GUCY1A2P33402 732 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 WDR18Q9BV38 432 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 TRIM34Q9BYJ4 488 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 MCOLN1Q9GZU1 580 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 ZSWIM8A7E2V4 1837 aa15.33■□□□□ 0.04
CD9-212ENST00000610354 ADGRA2Q96PE1 1338 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 FOXP2O15409 715 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 ASNSP08243 561 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 GADL1Q6ZQY3 521 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 CCDC129Q6ZRS4 1044 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
CD9-212ENST00000610354 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
CD9-212ENST00000610354 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
CD9-212ENST00000610354 TREML2Q5T2D2 321 aa15.31■□□□□ 0.04
CD9-212ENST00000610354 TLR2O60603 784 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 CYP2C8P10632 490 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 HMGCS2P54868 508 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 ABCB5Q2M3G0 1257 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 SBK1Q52WX2 424 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 C16orf86Q6ZW13 317 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 FASTKD5Q7L8L6 764 aaKnown RBP15.3■□□□□ 0.04
CD9-212ENST00000610354 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
CD9-212ENST00000610354 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 TBC1D2Q9BYX2 928 aa15.3■□□□□ 0.04
CD9-212ENST00000610354 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
CD9-212ENST00000610354 AKR1B1P15121 316 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 CDK8P49336 464 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 MTMR2Q13614 643 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 SEPT2Q15019 361 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 LRRFIP1Q32MZ4 808 aaKnown RBP15.29■□□□□ 0.04
CD9-212ENST00000610354 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 GIMAP6Q6P9H5 292 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 CD99L2Q8TCZ2 262 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 ACER1Q8TDN7 264 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 CPA4Q9UI42 421 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
CD9-212ENST00000610354 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 GNAT2P19087 354 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 BACE1P56817 501 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 SP3Q02447 781 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
CD9-212ENST00000610354 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 PROCA1Q8NCQ7 364 aaPredicted RBP15.28■□□□□ 0.04
CD9-212ENST00000610354 RILPL2Q969X0 211 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 ABHD8Q96I13 439 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 EMILIN3Q9NT22 766 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
CD9-212ENST00000610354 GREB1LQ9C091 1923 aaPredicted RBP15.28■□□□□ 0.04
CD9-212ENST00000610354 USP17L10C9JJH3 530 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 GSPT1P15170 499 aaKnown RBP15.27■□□□□ 0.04
CD9-212ENST00000610354 SDSP20132 328 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 CTGFP29279 349 aa15.27■□□□□ 0.04
CD9-212ENST00000610354 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms