RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KRT9P35527 623 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 SCRN1Q12765 414 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 TCP10Q12799 353 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 ZSCAN10Q96SZ4 725 aaPredicted RBP15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 IKBKGQ9Y6K9 419 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 ZNF589Q86UQ0 364 aaPredicted RBP15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 UIMC1Q96RL1 719 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 NAPGQ99747 312 aaPredicted RBP15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 CYP21A2P08686 494 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 MTX1Q13505 466 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 TBC1D22AQ8WUA7 517 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 TUBBP07437 444 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 CHRNDQ07001 517 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 REXO1Q8N1G1 1221 aaKnown RBP15.96■□□□□ 0.15
PCDHB16-201ENST00000609684 ERBB3P21860 1342 aa15.96■□□□□ 0.14
PCDHB16-201ENST00000609684 CETN3O15182 167 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 CAPN2P17655 700 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 ZMYM1Q5SVZ6 1142 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 CABP7Q86V35 215 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 ATRIPQ8WXE1 791 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 VPS18Q9P253 973 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 ERCC3P19447 782 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 U2AF2P26368 475 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 CALCRLQ16602 461 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 HERC4Q5GLZ8 1057 aaPredicted RBP15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 MFSD14BQ5SR56 506 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 NELFBQ8WX92 580 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 TET3O43151 1660 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 ABCC3O15438 1527 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 A0A1W2PRG0 241 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 B4DLN1 442 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 CARD6Q9BX69 1037 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 GPR108Q9NPR9 543 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 RSPH14Q9UHP6 348 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 POLD1P28340 1107 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 TNNC1P63316 161 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 FERMT1Q9BQL6 677 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
PCDHB16-201ENST00000609684 ATP2C2O75185 946 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 CIAO1O76071 339 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 CCDC50Q8IVM0 306 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 PCDHA7Q9UN72 937 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 BTBD18B2RXH4 712 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 GTF2IP78347 998 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 TMTC1Q8IUR5 882 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 DDX12PQ92771 950 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 USP21Q9UK80 565 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 PLCB3Q01970 1234 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 LONRF3Q496Y0 759 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 GSTA5Q7RTV2 222 aa15.94■□□□□ 0.14
PCDHB16-201ENST00000609684 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 SIK1P57059 783 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 RAD51AP2Q09MP3 1159 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 USH1GQ495M9 461 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 JAKMIP2Q96AA8 810 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 TBC1D7Q9P0N9 293 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 ADCY10Q96PN6 1610 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 VWA3BQ502W6 1294 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 DPH6Q7L8W6 267 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 SMCO2A6NFE2 343 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 IGSF3O75054 1194 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 CMA1P23946 247 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 GPIHBP1Q8IV16 184 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 MYRIPQ8NFW9 859 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 FBXO18Q8NFZ0 1043 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 CCDC77Q9BR77 488 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 NUP58Q9BVL2 599 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 ANTXR1Q9H6X2 564 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 PTCH1Q13635 1447 aa15.93■□□□□ 0.14
PCDHB16-201ENST00000609684 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 H0YIN7 160 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 DNAJC21Q5F1R6 531 aaKnown RBP15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 TIGD1Q96MW7 591 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 IVLP07476 585 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 NF2P35240 595 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 OGFRQ9NZT2 677 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 BIN2Q9UBW5 565 aaPredicted RBP15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 ELF2Q15723 593 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 HDXQ7Z353 690 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 PNMA1Q8ND90 353 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 ARHGEF35A5YM69 484 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 CCDC169A6NNP5 214 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 NELFCDQ8IXH7 590 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 BLIDQ8IZY5 108 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 GJA3Q9Y6H8 435 aa15.92■□□□□ 0.14
PCDHB16-201ENST00000609684 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
PCDHB16-201ENST00000609684 TERF1P54274 439 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms