RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ANKZF1Q9H8Y5 726 aa25.45■■□□□ 1.66
SHANK2-220ENST00000608988 ZCCHC17Q9NP64 241 aaKnown RBP25.45■■□□□ 1.66
SHANK2-220ENST00000608988 SAMSN1Q9NSI8 373 aaKnown RBP25.45■■□□□ 1.66
SHANK2-220ENST00000608988 CTAGE9A4FU28 777 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 BTBD18B2RXH4 712 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 ZBTB22O15209 634 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 RXRAP19793 462 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 METTL24Q5JXM2 366 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 TMTC2Q8N394 836 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 ZBTB38Q8NAP3 1195 aaPredicted RBP25.44■■□□□ 1.66
SHANK2-220ENST00000608988 MED15Q96RN5 788 aa25.44■■□□□ 1.66
SHANK2-220ENST00000608988 TEX13AQ9BXU3 409 aaPredicted RBP25.44■■□□□ 1.66
SHANK2-220ENST00000608988 AATFQ9NY61 560 aaKnown RBP eCLIP25.44■■□□□ 1.66
SHANK2-220ENST00000608988 ADD3Q9UEY8 706 aaKnown RBP25.44■■□□□ 1.66
SHANK2-220ENST00000608988 IFIT3O14879 490 aaKnown RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 MFAP3LO75121 409 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 BMP15O95972 392 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 ACTN2P35609 894 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 PIP4K2BP78356 416 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 STRBPQ96SI9 672 aaKnown RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 ACBD3Q9H3P7 528 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 SOWAHDA6NJG2 315 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 PATL2C9JE40 543 aaKnown RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 PDE6AP16499 860 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 ARID4AP29374 1257 aaPredicted RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 SART3Q15020 963 aaKnown RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 RAD9BQ6WBX8 426 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 TMTC1Q8IUR5 882 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 TRMT44Q8IYL2 757 aaKnown RBP25.43■■□□□ 1.66
SHANK2-220ENST00000608988 SENP2Q9HC62 589 aa25.43■■□□□ 1.66
SHANK2-220ENST00000608988 ZNF532Q9HCE3 1301 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 SYNRGQ9UMZ2 1314 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 CHD4Q14839 1912 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 TCRBV5S4A2TA0A5A2 114 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 H3BQF6 201 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 RTN1Q16799 776 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 PTPN21Q16825 1174 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 DENND2AQ9ULE3 1009 aa25.42■■□□□ 1.66
SHANK2-220ENST00000608988 RBL2Q08999 1139 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 CUL4BQ13620 913 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 TRIM14Q14142 442 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 PPP2R5BQ15173 497 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 NKX1-1Q15270 411 aaPredicted RBP25.41■■□□□ 1.66
SHANK2-220ENST00000608988 PI16Q6UXB8 463 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 LEKR1Q6ZMV7 388 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 SH3RF1Q7Z6J0 888 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 GSDMAQ96QA5 445 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 PIH1D3Q9NQM4 214 aaKnown RBP25.41■■□□□ 1.66
SHANK2-220ENST00000608988 WWC3Q9ULE0 1092 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 L1RE1Q9UN81 338 aa25.41■■□□□ 1.66
SHANK2-220ENST00000608988 MYO5AQ9Y4I1 1855 aaKnown RBP25.41■■□□□ 1.66
SHANK2-220ENST00000608988 AIDAQ96BJ3 306 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 BCL9LQ86UU0 1499 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 MTF1Q14872 753 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 SPECC1Q5M775 1068 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 NAPGQ99747 312 aaPredicted RBP25.4■■□□□ 1.66
SHANK2-220ENST00000608988 RASSF4Q9H2L5 321 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 LZTFL1Q9NQ48 299 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 STRN4Q9NRL3 753 aa25.4■■□□□ 1.66
SHANK2-220ENST00000608988 LMAN1P49257 510 aa25.39■■□□□ 1.66
SHANK2-220ENST00000608988 KIF4BQ2VIQ3 1234 aa25.39■■□□□ 1.66
SHANK2-220ENST00000608988 HSP90AA4PQ58FG1 418 aa25.39■■□□□ 1.66
SHANK2-220ENST00000608988 AKNAD1Q5T1N1 836 aa25.39■■□□□ 1.66
SHANK2-220ENST00000608988 NKX2-3Q8TAU0 364 aa25.39■■□□□ 1.66
SHANK2-220ENST00000608988 IQSEC3Q9UPP2 1182 aaPredicted RBP25.39■■□□□ 1.66
SHANK2-220ENST00000608988 TNS3Q68CZ2 1445 aa25.39■■□□□ 1.65
SHANK2-220ENST00000608988 ARAP2Q8WZ64 1704 aa25.39■■□□□ 1.65
SHANK2-220ENST00000608988 GRIN1Q05586 938 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 SPAG1Q07617 926 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 ZNF827Q17R98 1081 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 ZNF569Q5MCW4 686 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CRACR2BQ8N4Y2 399 aaPredicted RBP25.38■■□□□ 1.65
SHANK2-220ENST00000608988 VGLL2Q8N8G2 317 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 FAM71BQ8TC56 605 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 FERMT2Q96AC1 680 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 NAPBQ9H115 298 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 ZSWIM5Q9P217 1185 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CTAGE15A4D2H0 777 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 IDH1O75874 414 aaKnown RBP25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CTAGE8P0CG41 777 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 KIF6Q6ZMV9 814 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CTAGE6Q86UF2 777 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CTAGE4Q8IX94 777 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 IFNL3Q8IZI9 196 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 STAG1Q8WVM7 1258 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 PYM1Q9BRP8 204 aaKnown RBP25.38■■□□□ 1.65
SHANK2-220ENST00000608988 CSRNP2Q9H175 543 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 MED4Q9NPJ6 270 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 PCDHB6Q9Y5E3 794 aa25.38■■□□□ 1.65
SHANK2-220ENST00000608988 TEX33O43247 280 aa25.37■■□□□ 1.65
SHANK2-220ENST00000608988 GNAT2P19087 354 aa25.37■■□□□ 1.65
SHANK2-220ENST00000608988 LDHAL6AQ6ZMR3 332 aa25.37■■□□□ 1.65
SHANK2-220ENST00000608988 ANKRD18BA2A2Z9 1011 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 TRIM75PA6NK02 468 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 XBP1P17861 261 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 MCM3P25205 808 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 WTAPQ15007 396 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 ZCRB1Q8TBF4 217 aaKnown RBP25.36■■□□□ 1.65
SHANK2-220ENST00000608988 MYL10Q9BUA6 226 aa25.36■■□□□ 1.65
SHANK2-220ENST00000608988 PDE11AQ9HCR9 933 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms