RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 BZW1Q7L1Q6 419 aaKnown RBP14.18□□□□□ -0.14
CTCFL-218ENST00000608440 XIRP1Q702N8 1843 aaKnown RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 EIF4E1BA6NMX2 242 aaKnown RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 PSMA5P28066 241 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 PRPHP41219 470 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 ANKRD1Q15327 319 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 ARL8AQ96BM9 186 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 STAMBPL1Q96FJ0 436 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 USP54Q70EL1 1684 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 GOLGA6L7A0A1B0GV03 622 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 SLC27A2O14975 620 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 BUB1BO60566 1050 aaPredicted RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 HOXC9P31274 260 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 HDLBPQ00341 1268 aaKnown RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 GUCY1A3Q02108 690 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 SPATS2Q86XZ4 545 aaKnown RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 ZNF473Q8WTR7 871 aaKnown RBP14.17□□□□□ -0.14
CTCFL-218ENST00000608440 RUFY2Q8WXA3 655 aa14.17□□□□□ -0.14
CTCFL-218ENST00000608440 SLC8A1P32418 973 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 TBX2Q13207 712 aaPredicted RBP14.16□□□□□ -0.14
CTCFL-218ENST00000608440 LAMB3Q13751 1172 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 BAIAP2L1Q9UHR4 511 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 NFAT5O94916 1531 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 PYGBP11216 843 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 RPS6KB1P23443 525 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 MIS18BP1Q6P0N0 1132 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
CTCFL-218ENST00000608440 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 ZNF396Q96N95 335 aaPredicted RBP14.16□□□□□ -0.14
CTCFL-218ENST00000608440 SEC62Q99442 399 aaKnown RBP14.16□□□□□ -0.14
CTCFL-218ENST00000608440 CHCHD3Q9NX63 227 aaKnown RBP14.16□□□□□ -0.14
CTCFL-218ENST00000608440 NEDD4P46934 1319 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 AOX1Q06278 1338 aa14.16□□□□□ -0.14
CTCFL-218ENST00000608440 ENC1O14682 589 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 MTA1Q13330 715 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 SND1Q7KZF4 910 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTCFL-218ENST00000608440 YTHDF3Q7Z739 585 aaKnown RBP14.15□□□□□ -0.14
CTCFL-218ENST00000608440 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
CTCFL-218ENST00000608440 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
CTCFL-218ENST00000608440 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 EZH1Q92800 747 aaPredicted RBP14.15□□□□□ -0.14
CTCFL-218ENST00000608440 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 LRRC2Q9BYS8 371 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 BATF3Q9NR55 127 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
CTCFL-218ENST00000608440 DNM1LO00429 736 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 SRGAP2O75044 1071 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 RTN3O95197 1032 aaPredicted RBP14.14□□□□□ -0.15
CTCFL-218ENST00000608440 LSP1P33241 339 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 TUBB2AQ13885 445 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 GNPTABQ3T906 1256 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 TTMPQ5BVD1 217 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 HHATQ5VTY9 493 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 FAM227BQ96M60 508 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 TUBB2BQ9BVA1 445 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 HOMER3Q9NSC5 361 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 ADALQ6DHV7 355 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 B4GALNT2Q8NHY0 566 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 HOOK2Q96ED9 719 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 MMS19Q96T76 1030 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 GOLGA8KD6RF30 607 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 STK38Q15208 465 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 SPECC1Q5M775 1068 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 SLC30A9Q6PML9 568 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 Q6ZUG5 572 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 CCT8L2Q96SF2 557 aa14.14□□□□□ -0.15
CTCFL-218ENST00000608440 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 PPFIA2O75334 1257 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 GCP02774 474 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 NBPF7P0C2Y1 421 aaPredicted RBP14.13□□□□□ -0.15
CTCFL-218ENST00000608440 MRPS25P82663 173 aaKnown RBP14.13□□□□□ -0.15
CTCFL-218ENST00000608440 APBA1Q02410 837 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 FILIP1LQ4L180 1135 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 BRINP3Q76B58 766 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 MAGEC3Q8TD91 643 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 RNPC3Q96LT9 517 aaKnown RBP14.13□□□□□ -0.15
CTCFL-218ENST00000608440 TSGA10Q9BZW7 698 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 EPN3Q9H201 632 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 SMNDC1O75940 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
CTCFL-218ENST00000608440 MCM3P25205 808 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 RUFY1Q96T51 708 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 EYA1Q99502 592 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
CTCFL-218ENST00000608440 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms