RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 VWCEQ96DN2 955 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 ATG4CQ96DT6 458 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 HEXIM2Q96MH2 286 aaKnown RBP2.67□□□□□ -1.98
SNORA28-201ENST00000606769 SLC9A7Q96T83 725 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 FAM83CQ9BQN1 747 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 TNKS2Q9H2K2 1166 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 CNNM2Q9H8M5 875 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 ZNF408Q9H9D4 720 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 DAGLAQ9Y4D2 1042 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 LTBP3Q9NS15 1303 aa2.67□□□□□ -1.98
SNORA28-201ENST00000606769 PRR19A6NJB7 356 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 FAM170BA6NMN3 283 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 TNFRSF10CO14798 259 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 DYRK3O43781 588 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 BPNT1O95861 308 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 F13BP05160 661 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 NME1P15531 152 aaKnown RBP2.66□□□□□ -1.98
SNORA28-201ENST00000606769 MCM4P33991 863 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ZNF165P49910 485 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ETF1P62495 437 aaKnown RBP2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ARID5AQ03989 594 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 RBL2Q08999 1139 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 COL9A2Q14055 689 aaPredicted RBP2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ARSHQ5FYA8 562 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 SLC6A19Q695T7 634 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 GPAT2Q6NUI2 795 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ZAR1Q86SH2 424 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 CLEC10AQ8IUN9 316 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 HID1Q8IV36 788 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 TMEM192Q8IY95 271 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 ZNF507Q8TCN5 953 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 TMEM40Q8WWA1 233 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 DUSP23Q9BVJ7 150 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 SRRTQ9BXP5 876 aaKnown RBP2.66□□□□□ -1.98
SNORA28-201ENST00000606769 GMIPQ9P107 970 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 PCOLCE2Q9UKZ9 415 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 RAXQ9Y2V3 346 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 MRVI1Q9Y6F6 885 aa2.66□□□□□ -1.98
SNORA28-201ENST00000606769 FAM95CA0A1B0GW59 222 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 A0A1W2PQH9 124 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 PRR33A8MZF0 331 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 MSTNO14793 375 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 DHX15O43143 795 aaKnown RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 SART1O43290 800 aaKnown RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 GAS2O43903 313 aaKnown RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 RNGTTO60942 597 aaKnown RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 LRIG2O94898 1065 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 FURINP09958 794 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 H2AFB1P0C5Y9 115 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 H2AFB2P0C5Z0 115 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 LMNB1P20700 586 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 USP11P51784 963 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 SERINC3Q13530 473 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 NFKBIBQ15653 356 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 NLRC3Q7RTR2 1065 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 PPFIBP1Q86W92 1011 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 ZDHHC13Q8IUH4 622 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 TAB3Q8N5C8 712 aaPredicted RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 CELF2-AS1Q8N7Q2 184 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 BAHD1Q8TBE0 780 aaPredicted RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 XAGE3Q8WTP9 111 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 SREK1Q8WXA9 508 aaKnown RBP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 KLHL6Q8WZ60 621 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 SPATA32Q96LK8 384 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 KIF2CQ99661 725 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.65□□□□□ -1.99
SNORA28-201ENST00000606769 FOXQ1Q9C009 403 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 PIDD1Q9HB75 910 aa2.65□□□□□ -1.99
SNORA28-201ENST00000606769 C9IYK1 514 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 RGS13O14921 159 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 SMAD7O15105 426 aaKnown RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 SHOXO15266 292 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 FAM87AP0C7U9 286 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 FSTP19883 344 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 CASP7P55210 303 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 EIF6P56537 245 aaKnown RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 PDE4BQ07343 736 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 NFIAQ12857 509 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 MAP7Q14244 749 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 RNF43Q68DV7 783 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 INTS3Q68E01 1043 aaKnown RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 MRM1Q6IN84 353 aaKnown RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 OGFOD3Q6PK18 319 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 UNC5AQ6ZN44 842 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 NFXL1Q6ZNB6 911 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 ZNF765Q7L2R6 523 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 TTC6Q86TZ1 520 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 WFDC3Q8IUB2 231 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 TOP6BLQ8N6T0 577 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 ZNF513Q8N8E2 541 aaPredicted RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 FAM13CQ8NE31 585 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 CYB5D2Q8WUJ1 264 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 HNRNPLLQ8WVV9 542 aaKnown RBP2.64□□□□□ -1.99
SNORA28-201ENST00000606769 ANAPC16Q96DE5 110 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 Q96M66 194 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 MFSD14AQ96MC6 490 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 FERD3LQ96RJ6 166 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 TANGO6Q9C0B7 1094 aa2.64□□□□□ -1.99
SNORA28-201ENST00000606769 KCNF1Q9H3M0 494 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms