RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
HCG18-247ENST00000602698 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
HCG18-247ENST00000602698 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
HCG18-247ENST00000602698 RCAN3Q9UKA8 241 aa11.66□□□□□ -0.54
HCG18-247ENST00000602698 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
HCG18-247ENST00000602698 APBB1O00213 710 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 JAG1P78504 1218 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 PABPC4Q13310 644 aaKnown RBP eCLIP11.65□□□□□ -0.54
HCG18-247ENST00000602698 MTMR2Q13614 643 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 SHROOM1Q2M3G4 852 aaPredicted RBP11.65□□□□□ -0.54
HCG18-247ENST00000602698 CLASRPQ8N2M8 674 aaKnown RBP11.65□□□□□ -0.54
HCG18-247ENST00000602698 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 ZBTB21Q9ULJ3 1066 aa11.65□□□□□ -0.54
HCG18-247ENST00000602698 TNPO2O14787 897 aaKnown RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 GDF11O95390 407 aa11.64□□□□□ -0.55
HCG18-247ENST00000602698 USP5P45974 858 aa11.64□□□□□ -0.55
HCG18-247ENST00000602698 GCLCP48506 637 aaPredicted RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 FLT3LGP49771 235 aa11.64□□□□□ -0.55
HCG18-247ENST00000602698 BACE1P56817 501 aa11.64□□□□□ -0.55
HCG18-247ENST00000602698 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
HCG18-247ENST00000602698 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
HCG18-247ENST00000602698 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 ASCC2Q9H1I8 757 aaPredicted RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
HCG18-247ENST00000602698 ALPK3Q96L96 1907 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 IFIT2P09913 472 aaKnown RBP11.63□□□□□ -0.55
HCG18-247ENST00000602698 CCL5P13501 91 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 UBXN2AP68543 259 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 IRF5Q13568 498 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 EHD4Q9H223 541 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 TMOD4Q9NZQ9 345 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
HCG18-247ENST00000602698 SERPINB13Q9UIV8 391 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
HCG18-247ENST00000602698 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 ADCY3O60266 1144 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 GJB1P08034 283 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 ELNP15502 786 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 PDE6AP16499 860 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 HOXA7P31268 230 aaPredicted RBP11.62□□□□□ -0.55
HCG18-247ENST00000602698 GJA8P48165 433 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 IRX3P78415 501 aaPredicted RBP11.62□□□□□ -0.55
HCG18-247ENST00000602698 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 TATDN1Q6P1N9 297 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 COA7Q96BR5 231 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 DNAJC2Q99543 621 aaKnown RBP11.62□□□□□ -0.55
HCG18-247ENST00000602698 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
HCG18-247ENST00000602698 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 RLFQ13129 1914 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 GOLIM4O00461 696 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 GH2P01242 217 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 INHAP05111 366 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 GCC1Q96CN9 775 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
HCG18-247ENST00000602698 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 PLCD1P51178 756 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 HERVK_113P62684 666 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
HCG18-247ENST00000602698 CRNKL1Q9BZJ0 848 aaKnown RBP11.6□□□□□ -0.55
HCG18-247ENST00000602698 BCL11AQ9H165 835 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
HCG18-247ENST00000602698 RANBP2P49792 3224 aaKnown RBP11.6□□□□□ -0.55
HCG18-247ENST00000602698 ATP5JP18859 108 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 SHMT1P34896 483 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 GABPAQ06546 454 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 CERKLQ49MI3 558 aaPredicted RBP11.59□□□□□ -0.55
HCG18-247ENST00000602698 UBE2Q1Q7Z7E8 422 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 LCORLQ8N3X6 602 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
HCG18-247ENST00000602698 C12orf42Q96LP6 360 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 P2RX7Q99572 595 aaKnown RBP11.59□□□□□ -0.55
HCG18-247ENST00000602698 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 TXNRD2Q9NNW7 524 aa11.59□□□□□ -0.55
HCG18-247ENST00000602698 COL11A1P12107 1806 aaPredicted RBP11.58□□□□□ -0.56
HCG18-247ENST00000602698 PEX10O60683 326 aa11.58□□□□□ -0.56
HCG18-247ENST00000602698 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
HCG18-247ENST00000602698 ADD2P35612 726 aa11.58□□□□□ -0.56
HCG18-247ENST00000602698 EVX2Q03828 476 aa11.58□□□□□ -0.56
HCG18-247ENST00000602698 RAB3GAP1Q15042 981 aa11.58□□□□□ -0.56
HCG18-247ENST00000602698 ZYXQ15942 572 aaKnown RBP11.58□□□□□ -0.56
HCG18-247ENST00000602698 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
HCG18-247ENST00000602698 GTF3C2Q8WUA4 911 aaPredicted RBP11.58□□□□□ -0.56
HCG18-247ENST00000602698 SDR42E1Q8WUS8 393 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms