RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 RSRP1Q9BUV0 290 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 EMILIN2Q9BXX0 1053 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 KCNK4Q9NYG8 393 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 GGT7Q9UJ14 662 aa6.79□□□□□ -1.32
VRK3-222ENST00000601324 DUOX2Q9NRD8 1548 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 RNF225M0QZC1 329 aaPredicted RBP6.78□□□□□ -1.32
VRK3-222ENST00000601324 DDX3YO15523 660 aaKnown RBP6.78□□□□□ -1.32
VRK3-222ENST00000601324 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
VRK3-222ENST00000601324 PWP1Q13610 501 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 POU4F3Q15319 338 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 MAP3K11Q16584 847 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 TTBK2Q6IQ55 1244 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 IGF2-ASQ6U949 168 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 USP26Q9BXU7 913 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 LAMC1P11047 1609 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 PIK3R4Q99570 1358 aa6.78□□□□□ -1.32
VRK3-222ENST00000601324 LOC100289279A0A1B0GTE1 492 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 GSTP1P09211 210 aaKnown RBP6.77□□□□□ -1.33
VRK3-222ENST00000601324 TSPY4P0CV99 314 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 TSPY10P0CW01 314 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 MAOBP27338 520 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 LRRC14Q15048 493 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 LRRC59Q96AG4 307 aaKnown RBP6.77□□□□□ -1.33
VRK3-222ENST00000601324 TMEM74Q96NL1 305 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 COPRSQ9NQ92 184 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
VRK3-222ENST00000601324 BLMP54132 1417 aaPredicted RBP6.76□□□□□ -1.33
VRK3-222ENST00000601324 ZNF252P-AS1Q0IIN9 211 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 GRIK4Q16099 956 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 HP1BP3Q5SSJ5 553 aaPredicted RBP6.76□□□□□ -1.33
VRK3-222ENST00000601324 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 C9orf131Q5VYM1 1079 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 LLGL2Q6P1M3 1020 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 DEFB132Q7Z7B7 95 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 NT5DC4Q86YG4 428 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
VRK3-222ENST00000601324 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
VRK3-222ENST00000601324 CBX8Q9HC52 389 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 KRT82Q9NSB4 513 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 KBTBD4Q9NVX7 518 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 TRPC5Q9UL62 973 aaPredicted RBP6.76□□□□□ -1.33
VRK3-222ENST00000601324 ERBINQ96RT1 1412 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 RIMS2Q9UQ26 1411 aa6.76□□□□□ -1.33
VRK3-222ENST00000601324 WISP1O95388 367 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 ECEL1O95672 775 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 SELPP16109 830 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 ATF3P18847 181 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 GBP2P32456 591 aaPredicted RBP6.75□□□□□ -1.33
VRK3-222ENST00000601324 SCARA3Q6AZY7 606 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 ACAD11Q709F0 780 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 LENG1Q96BZ8 264 aaPredicted RBP6.75□□□□□ -1.33
VRK3-222ENST00000601324 NACC1Q96RE7 527 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
VRK3-222ENST00000601324 PTCH1Q13635 1447 aa6.75□□□□□ -1.33
VRK3-222ENST00000601324 MYOM2P54296 1465 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 F6X3S4 739 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 APBA3O96018 575 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 CTSBP07858 339 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
VRK3-222ENST00000601324 LMNB1P20700 586 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 HNRNPUQ00839 825 aaKnown RBP eCLIP6.74□□□□□ -1.33
VRK3-222ENST00000601324 SHISA2Q6UWI4 295 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.74□□□□□ -1.33
VRK3-222ENST00000601324 GRIN3AQ8TCU5 1115 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 KCNB2Q92953 911 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 RHOVQ96L33 236 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 CCDC86Q9H6F5 360 aaKnown RBP6.74□□□□□ -1.33
VRK3-222ENST00000601324 CACNA2D2Q9NY47 1150 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 USP21Q9UK80 565 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 TLR6Q9Y2C9 796 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 TMEM131LA2VDJ0 1609 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 TRPM2O94759 1503 aa6.74□□□□□ -1.33
VRK3-222ENST00000601324 KIF15Q9NS87 1388 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 C9orf172C9J069 976 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 TRIM37O94972 964 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 DLGAP3O95886 979 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
VRK3-222ENST00000601324 NRG1Q02297 640 aaPredicted RBP6.73□□□□□ -1.33
VRK3-222ENST00000601324 LMNB2Q03252 620 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 RAD51AP2Q09MP3 1159 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 ZNF394Q53GI3 561 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 MAP1SQ66K74 1059 aaPredicted RBP6.73□□□□□ -1.33
VRK3-222ENST00000601324 TMEM130Q8N3G9 435 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 RUSC1Q9BVN2 902 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
VRK3-222ENST00000601324 RNF208Q9H0X6 261 aa6.73□□□□□ -1.33
VRK3-222ENST00000601324 PCDHGB7Q9Y5F8 929 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms