RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 FOXP2O15409 715 aa21.19■□□□□ 0.98
USHBP1-209ENST00000598570 TBC1D8O95759 1140 aa21.19■□□□□ 0.98
USHBP1-209ENST00000598570 EVX2Q03828 476 aa21.19■□□□□ 0.98
USHBP1-209ENST00000598570 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
USHBP1-209ENST00000598570 HELLSQ9NRZ9 838 aa21.19■□□□□ 0.98
USHBP1-209ENST00000598570 USP17L12C9JPN9 530 aa21.18■□□□□ 0.98
USHBP1-209ENST00000598570 USP17L21D6R901 530 aa21.18■□□□□ 0.98
USHBP1-209ENST00000598570 GPR25O00155 361 aa21.18■□□□□ 0.98
USHBP1-209ENST00000598570 POLR3DP05423 398 aaPredicted RBP21.18■□□□□ 0.98
USHBP1-209ENST00000598570 FASTKD5Q7L8L6 764 aaKnown RBP21.18■□□□□ 0.98
USHBP1-209ENST00000598570 ZNF280CQ8ND82 737 aa21.18■□□□□ 0.98
USHBP1-209ENST00000598570 SEC62Q99442 399 aaKnown RBP21.18■□□□□ 0.98
USHBP1-209ENST00000598570 SWAP70Q9UH65 585 aa21.18■□□□□ 0.98
USHBP1-209ENST00000598570 CYP2D6P10635 497 aa21.17■□□□□ 0.98
USHBP1-209ENST00000598570 CRHR2Q13324 411 aa21.17■□□□□ 0.98
USHBP1-209ENST00000598570 C16orf86Q6ZW13 317 aa21.17■□□□□ 0.98
USHBP1-209ENST00000598570 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.17■□□□□ 0.98
USHBP1-209ENST00000598570 ZBTB21Q9ULJ3 1066 aa21.17■□□□□ 0.98
USHBP1-209ENST00000598570 ROBO3Q96MS0 1386 aa21.16■□□□□ 0.98
USHBP1-209ENST00000598570 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
USHBP1-209ENST00000598570 GUCY1A2P33402 732 aa21.16■□□□□ 0.98
USHBP1-209ENST00000598570 ALX1Q15699 326 aa21.16■□□□□ 0.98
USHBP1-209ENST00000598570 SHROOM1Q2M3G4 852 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-209ENST00000598570 PROCA1Q8NCQ7 364 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-209ENST00000598570 EPB41L4AQ9HCS5 686 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-209ENST00000598570 ARPP21Q9UBL0 812 aaPredicted RBP21.16■□□□□ 0.98
USHBP1-209ENST00000598570 LOC285556D6RIA3 1793 aa21.15■□□□□ 0.98
USHBP1-209ENST00000598570 SMIM22K7EJ46 135 aa21.15■□□□□ 0.98
USHBP1-209ENST00000598570 SPP2Q13103 211 aa21.15■□□□□ 0.98
USHBP1-209ENST00000598570 CERKLQ49MI3 558 aaPredicted RBP21.15■□□□□ 0.98
USHBP1-209ENST00000598570 C19orf81C9J6K1 198 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 TLR2O60603 784 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 SDSP20132 328 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 BACE1P56817 501 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 IFNL3Q8IZI9 196 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 ZNF296Q8WUU4 475 aaPredicted RBP21.14■□□□□ 0.97
USHBP1-209ENST00000598570 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 CCDC17Q96LX7 622 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 AS3MTQ9HBK9 375 aa21.14■□□□□ 0.97
USHBP1-209ENST00000598570 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.14■□□□□ 0.97
USHBP1-209ENST00000598570 CYP2D7A0A087X1C5 515 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 GH2P01242 217 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 CDK8P49336 464 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 MCMDC2Q4G0Z9 681 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 TTC22Q5TAA0 569 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 CENPQQ7L2Z9 268 aaPredicted RBP21.13■□□□□ 0.97
USHBP1-209ENST00000598570 CCDC84Q86UT8 332 aaPredicted RBP21.13■□□□□ 0.97
USHBP1-209ENST00000598570 DYNLL2Q96FJ2 89 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 TRIM34Q9BYJ4 488 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 ZFYVE28Q9HCC9 887 aa21.13■□□□□ 0.97
USHBP1-209ENST00000598570 PDHXO00330 501 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 GDF11O95390 407 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 ABCB5Q2M3G0 1257 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 SLC4A8Q2Y0W8 1093 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 C17orf99Q6UX52 265 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 SIAH1Q8IUQ4 282 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 C12orf42Q96LP6 360 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 FAM227BQ96M60 508 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 AGTPBP1Q9UPW5 1226 aa21.12■□□□□ 0.97
USHBP1-209ENST00000598570 GREB1LQ9C091 1923 aaPredicted RBP21.12■□□□□ 0.97
USHBP1-209ENST00000598570 A0A0D9SFI3 127 aa21.11■□□□□ 0.97
USHBP1-209ENST00000598570 TRIM75PA6NK02 468 aa21.11■□□□□ 0.97
USHBP1-209ENST00000598570 FKTNO75072 461 aa21.11■□□□□ 0.97
USHBP1-209ENST00000598570 GSPT1P15170 499 aaKnown RBP21.11■□□□□ 0.97
USHBP1-209ENST00000598570 HOXA7P31268 230 aaPredicted RBP21.11■□□□□ 0.97
USHBP1-209ENST00000598570 TAF1CQ15572 869 aaPredicted RBP21.11■□□□□ 0.97
USHBP1-209ENST00000598570 SLC44A5Q8NCS7 719 aa21.11■□□□□ 0.97
USHBP1-209ENST00000598570 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
USHBP1-209ENST00000598570 ZMYM6O95789 1325 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 USP17L10C9JJH3 530 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 FGRP09769 529 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 AMOTL1Q8IY63 956 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 NACAP1Q9BZK3 213 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 ANAPC4Q9UJX5 808 aa21.1■□□□□ 0.97
USHBP1-209ENST00000598570 HIP1O00291 1037 aa21.09■□□□□ 0.97
USHBP1-209ENST00000598570 NMIQ13287 307 aaPredicted RBP21.09■□□□□ 0.97
USHBP1-209ENST00000598570 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
USHBP1-209ENST00000598570 TMEM179Q6ZVK1 233 aa21.09■□□□□ 0.97
USHBP1-209ENST00000598570 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.09■□□□□ 0.97
USHBP1-209ENST00000598570 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
USHBP1-209ENST00000598570 MYH8P13535 1937 aa21.09■□□□□ 0.97
USHBP1-209ENST00000598570 BCRP11274 1271 aa21.08■□□□□ 0.97
USHBP1-209ENST00000598570 TREML2Q5T2D2 321 aa21.08■□□□□ 0.97
USHBP1-209ENST00000598570 CCDC129Q6ZRS4 1044 aa21.08■□□□□ 0.97
USHBP1-209ENST00000598570 RILPL2Q969X0 211 aa21.08■□□□□ 0.97
USHBP1-209ENST00000598570 CABP5Q9NP86 173 aa21.08■□□□□ 0.97
USHBP1-209ENST00000598570 AKR1B1P15121 316 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 RASA1P20936 1047 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 HMGCS2P54868 508 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 CAP1Q01518 475 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 SP3Q02447 781 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 SEPT2Q15019 361 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 PKN2Q16513 984 aaKnown RBP21.07■□□□□ 0.96
USHBP1-209ENST00000598570 VPS53Q5VIR6 699 aa21.07■□□□□ 0.96
USHBP1-209ENST00000598570 CTU1Q7Z7A3 348 aaKnown RBP21.07■□□□□ 0.96
USHBP1-209ENST00000598570 ZNF589Q86UQ0 364 aaPredicted RBP21.07■□□□□ 0.96
USHBP1-209ENST00000598570 IGKV6D-41A0A0C4DH26 115 aa21.06■□□□□ 0.96
USHBP1-209ENST00000598570 A0A1W2PRG0 241 aa21.06■□□□□ 0.96
USHBP1-209ENST00000598570 HSPD1P10809 573 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms