RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 MYOZ2Q9NPC6 264 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 LIMCH1Q9UPQ0 1083 aa15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-209ENST00000595803 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 PRC1O43663 620 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 CHST3Q7LGC8 479 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 MB21D2Q8IYB1 491 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 ESR2Q92731 530 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 OSBPL5Q9H0X9 879 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 MKNK2Q9HBH9 465 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 ZNF287Q9HBT7 754 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 ZNF70Q9UC06 446 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 WDR19Q8NEZ3 1342 aa15.39■□□□□ 0.05
SHKBP1-209ENST00000595803 ENTPD3O75355 529 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 HLA-DOAP06340 250 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 PLCD1P51178 756 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 CACNB3P54284 484 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 FBXO46Q6PJ61 603 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 KRT26Q7Z3Y9 468 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 ZNF444Q8N0Y2 327 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 LRRC2Q9BYS8 371 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 ZSWIM5Q9P217 1185 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 TACC3Q9Y6A5 838 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 BAZ2AQ9UIF9 1905 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 BRCA2P51587 3418 aa15.38■□□□□ 0.05
SHKBP1-209ENST00000595803 A0A0C4DFX4 3053 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 CLRN2A0PK11 232 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 SMIM22K7EJ46 135 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 ORC4O43929 436 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 RANBP6O60518 1105 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 KDM4AO75164 1064 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 FGRP09769 529 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 NT5C2P49902 561 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 TCP10Q12799 353 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 NFIAQ12857 509 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 COL9A3Q14050 684 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 TMEM87BQ96K49 555 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 LARP6Q9BRS8 491 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 NEDD4P46934 1319 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 CENPFP49454 3210 aa15.37■□□□□ 0.05
SHKBP1-209ENST00000595803 ERICH2A1L162 156 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 TCP10L2B9ZVM9 353 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 WNT10BO00744 389 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 PRDM1O75626 825 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 TOB2Q14106 344 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 SPRYD3Q8NCJ5 442 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 BRF1Q92994 677 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 VEZTQ9HBM0 779 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 FAM198AQ9UFP1 575 aa15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHKBP1-209ENST00000595803 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 IFIT3O14879 490 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 TNNI2P48788 182 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 CDK8P49336 464 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 ANTXR2P58335 489 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 EVX2Q03828 476 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 NBPF9Q3BBW0 867 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 TBC1D10BQ4KMP7 808 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 RASAL3Q86YV0 1011 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 FOXP4Q8IVH2 680 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 FAM151AQ8WW52 585 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 MTA3Q9BTC8 594 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 SH2B1Q9NRF2 756 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 PI4KBQ9UBF8 816 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 LAMA4Q16363 1823 aa15.35■□□□□ 0.05
SHKBP1-209ENST00000595803 NAV1Q8NEY1 1877 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 TFAP4Q01664 338 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 IQCA1Q86XH1 822 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 TMTC2Q8N394 836 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 FBXL16Q8N461 479 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
SHKBP1-209ENST00000595803 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms