RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SLAIN1Q8ND83 568 aa20.71■□□□□ 0.91
CCDC9-202ENST00000595659 SHISA4Q96DD7 197 aa20.71■□□□□ 0.91
CCDC9-202ENST00000595659 EDC3Q96F86 508 aaKnown RBP20.71■□□□□ 0.91
CCDC9-202ENST00000595659 TMOD4Q9NZQ9 345 aa20.71■□□□□ 0.91
CCDC9-202ENST00000595659 GH2P01242 217 aa20.7■□□□□ 0.9
CCDC9-202ENST00000595659 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
CCDC9-202ENST00000595659 COA7Q96BR5 231 aa20.7■□□□□ 0.9
CCDC9-202ENST00000595659 UNC93B1Q9H1C4 597 aa20.7■□□□□ 0.9
CCDC9-202ENST00000595659 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 PDE6AP16499 860 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 GCLCP48506 637 aaPredicted RBP20.69■□□□□ 0.9
CCDC9-202ENST00000595659 PLCD1P51178 756 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
CCDC9-202ENST00000595659 P2RX7Q99572 595 aaKnown RBP20.69■□□□□ 0.9
CCDC9-202ENST00000595659 RIOK1Q9BRS2 568 aaKnown RBP20.69■□□□□ 0.9
CCDC9-202ENST00000595659 MAST2Q6P0Q8 1798 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 PHIPQ8WWQ0 1821 aa20.69■□□□□ 0.9
CCDC9-202ENST00000595659 KIAA0100Q14667 2235 aaKnown RBP20.68■□□□□ 0.9
CCDC9-202ENST00000595659 INHAP05111 366 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 GJB1P08034 283 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 TTF1Q15361 905 aaPredicted RBP20.68■□□□□ 0.9
CCDC9-202ENST00000595659 SLFNL1Q499Z3 407 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 CERS3Q8IU89 383 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 BOLA2Q9H3K6 86 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 SERPINB13Q9UIV8 391 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 ZNF532Q9HCE3 1301 aa20.68■□□□□ 0.9
CCDC9-202ENST00000595659 RAB11FIP3O75154 756 aa20.67■□□□□ 0.9
CCDC9-202ENST00000595659 EVX2Q03828 476 aa20.67■□□□□ 0.9
CCDC9-202ENST00000595659 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
CCDC9-202ENST00000595659 ZYXQ15942 572 aaKnown RBP20.67■□□□□ 0.9
CCDC9-202ENST00000595659 EMILIN3Q9NT22 766 aa20.67■□□□□ 0.9
CCDC9-202ENST00000595659 C19orf81C9J6K1 198 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 POLR3DP05423 398 aaPredicted RBP20.66■□□□□ 0.9
CCDC9-202ENST00000595659 GJA8P48165 433 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 IRF5Q13568 498 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 CERKLQ49MI3 558 aaPredicted RBP20.66■□□□□ 0.9
CCDC9-202ENST00000595659 TATDN1Q6P1N9 297 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 TTC6Q86TZ1 520 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 PXYLP1Q8TE99 480 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 GINM1Q9NU53 330 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 SIPA1L1O43166 1804 aa20.66■□□□□ 0.9
CCDC9-202ENST00000595659 SMARCA5O60264 1052 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-202ENST00000595659 HOXA7P31268 230 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-202ENST00000595659 HERVK_113P62684 666 aa20.65■□□□□ 0.9
CCDC9-202ENST00000595659 USP17L2Q6R6M4 530 aa20.65■□□□□ 0.9
CCDC9-202ENST00000595659 NKX2-3Q8TAU0 364 aa20.65■□□□□ 0.9
CCDC9-202ENST00000595659 U2AF1L4Q8WU68 220 aaKnown RBP20.65■□□□□ 0.9
CCDC9-202ENST00000595659 SDR42E1Q8WUS8 393 aa20.65■□□□□ 0.9
CCDC9-202ENST00000595659 CHMP4BQ9H444 224 aaKnown RBP20.65■□□□□ 0.9
CCDC9-202ENST00000595659 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
CCDC9-202ENST00000595659 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.9
CCDC9-202ENST00000595659 RBBP6Q7Z6E9 1792 aaKnown RBP20.64■□□□□ 0.9
CCDC9-202ENST00000595659 TCRBV5S4A2TA0A5A2 114 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 CHGBP05060 677 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 SHMT1P34896 483 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 ABCB5Q2M3G0 1257 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 LCORLQ8N3X6 602 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 ACER1Q8TDN7 264 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC9-202ENST00000595659 DEFB118Q96PH6 123 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 FEZ1Q99689 392 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 CRNKL1Q9BZJ0 848 aaKnown RBP20.64■□□□□ 0.89
CCDC9-202ENST00000595659 EHD4Q9H223 541 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 GJD2Q9UKL4 321 aa20.64■□□□□ 0.89
CCDC9-202ENST00000595659 H0YGN5 161 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 SGPL1O95470 568 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 CYP2D6P10635 497 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 TMED8Q6PL24 325 aaPredicted RBP20.63■□□□□ 0.89
CCDC9-202ENST00000595659 DPF3Q92784 378 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 ARMT1Q9H993 441 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 PAG1Q9NWQ8 432 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 MORF4L1Q9UBU8 362 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 PTPRFP10586 1907 aa20.63■□□□□ 0.89
CCDC9-202ENST00000595659 TFRCP02786 760 aaKnown RBP20.62■□□□□ 0.89
CCDC9-202ENST00000595659 ATP5JP18859 108 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 CYP2B6P20813 491 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 TRIM32Q13049 653 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 PDE3AQ14432 1141 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 Q3C1V9 767 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 HABP4Q5JVS0 413 aaKnown RBP20.62■□□□□ 0.89
CCDC9-202ENST00000595659 POTEEQ6S8J3 1075 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 GPRC5AQ8NFJ5 357 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 CABP5Q9NP86 173 aa20.62■□□□□ 0.89
CCDC9-202ENST00000595659 PRKAB2O43741 272 aa20.61■□□□□ 0.89
CCDC9-202ENST00000595659 UBE2Q1Q7Z7E8 422 aa20.61■□□□□ 0.89
CCDC9-202ENST00000595659 DCP1AQ9NPI6 582 aaPredicted RBP20.61■□□□□ 0.89
CCDC9-202ENST00000595659 LOC285556D6RIA3 1793 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 MPHOSPH10O00566 681 aaKnown RBP20.6■□□□□ 0.89
CCDC9-202ENST00000595659 FARP2O94887 1054 aaPredicted RBP20.6■□□□□ 0.89
CCDC9-202ENST00000595659 MBD4O95243 580 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 GUCY1A2P33402 732 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 ADD2P35612 726 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 GABPAQ06546 454 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 SEPT2Q15019 361 aa20.6■□□□□ 0.89
CCDC9-202ENST00000595659 SLC44A5Q8NCS7 719 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms