RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
SHKBP1-206ENST00000595523 CYP2D7A0A087X1C5 515 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 FKTNO75072 461 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 DGKZQ13574 1117 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 SEC62Q99442 399 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 TRIM34Q9BYJ4 488 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 SLC4A4Q9Y6R1 1079 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
SHKBP1-206ENST00000595523 GSG1L2A8MUP6 293 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 PDHXO00330 501 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 GPAA1O43292 621 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 ASNSP08243 561 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 SPP2Q13103 211 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 CTU1Q7Z7A3 348 aaKnown RBP13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 SLC44A5Q8NCS7 719 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 WDR18Q9BV38 432 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 EPB41L4AQ9HCS5 686 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-206ENST00000595523 RLFQ13129 1914 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 BRCA2P51587 3418 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 USP17L12C9JPN9 530 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 USP17L21D6R901 530 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 TLR2O60603 784 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 GH2P01242 217 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 GUCY1A2P33402 732 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 C12orf60Q5U649 245 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 GADL1Q6ZQY3 521 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
SHKBP1-206ENST00000595523 FOXP2O15409 715 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 CYP2C8P10632 490 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 PDE4AP27815 886 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 HMGCS2P54868 508 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 SP3Q02447 781 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 MTMR2Q13614 643 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 CERKLQ49MI3 558 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 TBC1D2Q9BYX2 928 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
SHKBP1-206ENST00000595523 LAMA4Q16363 1823 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 BACE1P56817 501 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 ABCB5Q2M3G0 1257 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
SHKBP1-206ENST00000595523 CTGFP29279 349 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 SEPT2Q15019 361 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 OTOP1Q7RTM1 612 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 PARK7Q99497 189 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 ARHGAP39Q9C0H5 1083 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 KIAA0100Q14667 2235 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
SHKBP1-206ENST00000595523 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 TNRC18O15417 2968 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 CAPN15O75808 1086 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 BCRP11274 1271 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 AKR1B1P15121 316 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 GNAT2P19087 354 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 CDK8P49336 464 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SHKBP1-206ENST00000595523 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
SHKBP1-206ENST00000595523 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-206ENST00000595523 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms