RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 SWAP70Q9UH65 585 aa17.24■□□□□ 0.35
CAPN12-202ENST00000593700 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 KDM4AO75164 1064 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 FGRP09769 529 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 TNNI2P48788 182 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
CAPN12-202ENST00000593700 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 BRF1Q92994 677 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 AGXT2Q9BYV1 514 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
CAPN12-202ENST00000593700 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
CAPN12-202ENST00000593700 ANGEL1Q9UNK9 670 aaKnown RBP17.23■□□□□ 0.35
CAPN12-202ENST00000593700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
CAPN12-202ENST00000593700 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 GREB1LQ9C091 1923 aaPredicted RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 RANBP6O60518 1105 aaKnown RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 C16orf86Q6ZW13 317 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 EHD4Q9H223 541 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 PGAP2Q9UHJ9 254 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.22■□□□□ 0.35
CAPN12-202ENST00000593700 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
CAPN12-202ENST00000593700 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 CYP2D6P10635 497 aa17.21■□□□□ 0.35
CAPN12-202ENST00000593700 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
CAPN12-202ENST00000593700 ZNF444Q8N0Y2 327 aaPredicted RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
CAPN12-202ENST00000593700 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 PRMT6Q96LA8 375 aaPredicted RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
CAPN12-202ENST00000593700 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
CAPN12-202ENST00000593700 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.34
CAPN12-202ENST00000593700 LIFRP42702 1097 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 ANTXR2P58335 489 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 WTAPQ15007 396 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 TMEM67Q5HYA8 995 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 NFXL1Q6ZNB6 911 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
CAPN12-202ENST00000593700 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
CAPN12-202ENST00000593700 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 WNT10BO00744 389 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 SH2B2O14492 632 aaPredicted RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TCP10Q12799 353 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 NFIAQ12857 509 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 CUL4AQ13619 759 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 DCPSQ96C86 337 aaKnown RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
CAPN12-202ENST00000593700 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 FAM198AQ9UFP1 575 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 PCDHAC2Q9Y5I4 1007 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 TNKSO95271 1327 aa17.19■□□□□ 0.34
CAPN12-202ENST00000593700 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 CLRN2A0PK11 232 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 PRDM1O75626 825 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 CDK8P49336 464 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPN12-202ENST00000593700 PLCD1P51178 756 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 CACNB3P54284 484 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 SAMD7Q7Z3H4 446 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 ZNF274Q96GC6 653 aaPredicted RBP17.18■□□□□ 0.34
CAPN12-202ENST00000593700 WDR70Q9NW82 654 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 TPCN1Q9ULQ1 816 aa17.18■□□□□ 0.34
CAPN12-202ENST00000593700 KLF18A0A0U1RQI7 1052 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 TCP10L2B9ZVM9 353 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
CAPN12-202ENST00000593700 RCAN1P53805 252 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 ME3Q16798 604 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
CAPN12-202ENST00000593700 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
CAPN12-202ENST00000593700 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms