RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
H3F3B-213ENST00000593254 TBC1D12O60347 775 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 PTPRAP18433 802 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 LRIT3Q3SXY7 679 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 NECAB2Q7Z6G3 386 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 DEFB123Q8N688 67 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 PIH1D3Q9NQM4 214 aaKnown RBP16.13■□□□□ 0.17
H3F3B-213ENST00000593254 STXBP5LQ9Y2K9 1186 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 ZHX2Q9Y6X8 837 aa16.13■□□□□ 0.17
H3F3B-213ENST00000593254 HMMRO75330 724 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 PPP4CP60510 307 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 AACSQ86V21 672 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 TEX11Q8IYF3 940 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 RHPN1Q8TCX5 695 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
H3F3B-213ENST00000593254 NOL10Q9BSC4 688 aaKnown RBP16.12■□□□□ 0.17
H3F3B-213ENST00000593254 OSBPL5Q9H0X9 879 aaPredicted RBP16.12■□□□□ 0.17
H3F3B-213ENST00000593254 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
H3F3B-213ENST00000593254 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.175e-11■■■□□ 16.3
H3F3B-213ENST00000593254 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
H3F3B-213ENST00000593254 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
H3F3B-213ENST00000593254 BAG3O95817 575 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 PLCG2P16885 1265 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 Q7L0L9 218 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.11■□□□□ 0.176e-12■■■□□ 15.4
H3F3B-213ENST00000593254 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 PICK1Q9NRD5 415 aa16.11■□□□□ 0.17
H3F3B-213ENST00000593254 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
H3F3B-213ENST00000593254 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
H3F3B-213ENST00000593254 KIF1BPQ96EK5 621 aa16.1■□□□□ 0.17
H3F3B-213ENST00000593254 MTMR10Q9NXD2 777 aa16.1■□□□□ 0.17
H3F3B-213ENST00000593254 DDX60LQ5H9U9 1706 aaKnown RBP16.1■□□□□ 0.17
H3F3B-213ENST00000593254 MYH1P12882 1939 aa16.09■□□□□ 0.17
H3F3B-213ENST00000593254 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
H3F3B-213ENST00000593254 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
H3F3B-213ENST00000593254 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
H3F3B-213ENST00000593254 COA7Q96BR5 231 aa16.09■□□□□ 0.17
H3F3B-213ENST00000593254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.17
H3F3B-213ENST00000593254 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
H3F3B-213ENST00000593254 NDUFB9Q9Y6M9 179 aa16.09■□□□□ 0.17
H3F3B-213ENST00000593254 FAM196BA6NMK8 535 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
H3F3B-213ENST00000593254 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.16
H3F3B-213ENST00000593254 FAM110CQ1W6H9 321 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
H3F3B-213ENST00000593254 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 DHX36Q9H2U1 1008 aaKnown RBP16.08■□□□□ 0.16
H3F3B-213ENST00000593254 ANTXR1Q9H6X2 564 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 HERC5Q9UII4 1024 aaKnown RBP16.08■□□□□ 0.16
H3F3B-213ENST00000593254 AGTPBP1Q9UPW5 1226 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 FLT1P17948 1338 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 PLXNB2O15031 1838 aa16.08■□□□□ 0.16
H3F3B-213ENST00000593254 HMGCRP04035 888 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 CYP7A1P22680 504 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 TMED8Q6PL24 325 aaPredicted RBP16.07■□□□□ 0.16
H3F3B-213ENST00000593254 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
H3F3B-213ENST00000593254 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
H3F3B-213ENST00000593254 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 GJD2Q9UKL4 321 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 LOC285556D6RIA3 1793 aa16.07■□□□□ 0.16
H3F3B-213ENST00000593254 RPTORQ8N122 1335 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 APBB1O00213 710 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 SYN1P17600 705 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 MAP3K12Q12852 859 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
H3F3B-213ENST00000593254 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
H3F3B-213ENST00000593254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
H3F3B-213ENST00000593254 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 CAP2P40123 477 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 DYNLL1P63167 89 aaKnown RBP16.05■□□□□ 0.16
H3F3B-213ENST00000593254 TRIM32Q13049 653 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
H3F3B-213ENST00000593254 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
H3F3B-213ENST00000593254 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 DNAJC18Q9H819 358 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
H3F3B-213ENST00000593254 MYH7P12883 1935 aa16.04■□□□□ 0.16
H3F3B-213ENST00000593254 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
H3F3B-213ENST00000593254 TTF1Q15361 905 aaPredicted RBP16.04■□□□□ 0.16
H3F3B-213ENST00000593254 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
H3F3B-213ENST00000593254 PROCA1Q8NCQ7 364 aaPredicted RBP16.04■□□□□ 0.16
H3F3B-213ENST00000593254 HMX1Q9NP08 348 aaPredicted RBP16.04■□□□□ 0.16
H3F3B-213ENST00000593254 PALD1Q9ULE6 856 aa16.04■□□□□ 0.16
H3F3B-213ENST00000593254 PFASO15067 1338 aa16.03■□□□□ 0.16
H3F3B-213ENST00000593254 GCLCP48506 637 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms