RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CTR9Q6PD62 1173 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 ARHGAP27Q6ZUM4 889 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 LINC00301Q8NCQ3 95 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 KCNG4Q8TDN1 519 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 WASF1Q92558 559 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 MYL10Q9BUA6 226 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 KCNQ5Q9NR82 932 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 TOMM22Q9NS69 142 aa21.72■■□□□ 1.07
HDAC5-212ENST00000593013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.72■■□□□ 1.07
HDAC5-212ENST00000593013 ZNF646O15015 1829 aaPredicted RBP21.71■■□□□ 1.07
HDAC5-212ENST00000593013 YDJCA8MPS7 323 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 G3V3G9 751 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 TYRO3Q06418 890 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
HDAC5-212ENST00000593013 PPP2R5BQ15173 497 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 RTN1Q16799 776 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 SBK1Q52WX2 424 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 DCAF8Q5TAQ9 597 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 CCAR1Q8IX12 1150 aaKnown RBP21.71■■□□□ 1.07
HDAC5-212ENST00000593013 ENGASEQ8NFI3 743 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 PHKBQ93100 1093 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 UBAC1Q9BSL1 405 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 JAG2Q9Y219 1238 aa21.71■■□□□ 1.07
HDAC5-212ENST00000593013 CCDC196A0A1B0GTZ2 297 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 CTAGE5O15320 804 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 ORC4O43929 436 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 GRIN3BO60391 1043 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 SSRP1Q08945 709 aaKnown RBP21.7■■□□□ 1.06
HDAC5-212ENST00000593013 ZSCAN30Q86W11 494 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 ZNF654Q8IZM8 581 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 DCP1AQ9NPI6 582 aaPredicted RBP21.7■■□□□ 1.06
HDAC5-212ENST00000593013 GJB4Q9NTQ9 266 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 MRVI1Q9Y6F6 885 aa21.7■■□□□ 1.06
HDAC5-212ENST00000593013 DCAF8L1A6NGE4 600 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 NT5C2P49902 561 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 ADALQ6DHV7 355 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 CCDC144CPQ8IYA2 1237 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 AIFM3Q96NN9 605 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 GOLPH3LQ9H4A5 285 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 PSME4Q14997 1843 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 TNKSO95271 1327 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 NAV1Q8NEY1 1877 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 U2AF2P26368 475 aaKnown RBP eCLIP21.69■■□□□ 1.06
HDAC5-212ENST00000593013 GTF2IP78347 998 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 FAM160A1Q05DH4 1040 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 SNW1Q13573 536 aaKnown RBP21.69■■□□□ 1.06
HDAC5-212ENST00000593013 CAMK4Q16566 473 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 CCDC73Q6ZRK6 1079 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 NBPF11Q86T75 865 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 FAM200AQ8TCP9 573 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 ZKSCAN3Q9BRR0 538 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 AATFQ9NY61 560 aaKnown RBP eCLIP21.69■■□□□ 1.06
HDAC5-212ENST00000593013 ARPP21Q9UBL0 812 aaPredicted RBP21.69■■□□□ 1.06
HDAC5-212ENST00000593013 PCDHA7Q9UN72 937 aa21.69■■□□□ 1.06
HDAC5-212ENST00000593013 ME1P48163 572 aa21.68■■□□□ 1.06
HDAC5-212ENST00000593013 ZSCAN10Q96SZ4 725 aaPredicted RBP21.68■■□□□ 1.06
HDAC5-212ENST00000593013 CLIC4Q9Y696 253 aa21.68■■□□□ 1.06
HDAC5-212ENST00000593013 DICER1Q9UPY3 1922 aaKnown RBP21.68■■□□□ 1.06
HDAC5-212ENST00000593013 CDK5RAP2Q96SN8 1893 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 POLR3DP05423 398 aaPredicted RBP21.67■■□□□ 1.06
HDAC5-212ENST00000593013 STK38Q15208 465 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 ANO1Q5XXA6 986 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 DZIP1Q86YF9 867 aaKnown RBP21.67■■□□□ 1.06
HDAC5-212ENST00000593013 NIM1KQ8IY84 436 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 FANCBQ8NB91 859 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 MRPS27Q92552 414 aaKnown RBP21.67■■□□□ 1.06
HDAC5-212ENST00000593013 SLC26A6Q9BXS9 759 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
HDAC5-212ENST00000593013 CYP2D7A0A087X1C5 515 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 USP17L12C9JPN9 530 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 USP17L21D6R901 530 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 SMIM22K7EJ46 135 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 SPTLC2O15270 562 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 CAVIN2O95810 425 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 TRIM29Q14134 588 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 STRIP1Q5VSL9 837 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 TRIM22Q8IYM9 498 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 CRACR2BQ8N4Y2 399 aaPredicted RBP21.66■■□□□ 1.06
HDAC5-212ENST00000593013 ENAHQ8N8S7 591 aaPredicted RBP21.66■■□□□ 1.06
HDAC5-212ENST00000593013 FSIP1Q8NA03 581 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 CCDC39Q9UFE4 941 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 LDHBP07195 334 aaKnown RBP21.66■■□□□ 1.06
HDAC5-212ENST00000593013 LMNB1P20700 586 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 GSTO1P78417 241 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 MFSD14BQ5SR56 506 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 DACT2Q5SW24 774 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 CKAP2LQ8IYA6 745 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 TBC1D22AQ8WUA7 517 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 JDP2Q8WYK2 163 aa21.66■■□□□ 1.06
HDAC5-212ENST00000593013 DDX60LQ5H9U9 1706 aaKnown RBP21.66■■□□□ 1.06
HDAC5-212ENST00000593013 ROBO3Q96MS0 1386 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 USP17L3A6NCW0 530 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 USP17L4A6NCW7 530 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 DEXIO95424 95 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 SLC3A2P08195 630 aaKnown RBP21.65■■□□□ 1.06
HDAC5-212ENST00000593013 PPP4CP60510 307 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 GRIK5Q16478 980 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 USP17L1Q7RTZ2 530 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 CERS5Q8N5B7 392 aa21.65■■□□□ 1.06
HDAC5-212ENST00000593013 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms