RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 CCL15Q16663 113 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 SBK1Q52WX2 424 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 CFHR5Q9BXR6 569 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
TRIM47-206ENST00000592942 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 GDF11O95390 407 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 TBC1D8O95759 1140 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 GNAT2P19087 354 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-206ENST00000592942 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 SLC44A5Q8NCS7 719 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 DOCK1Q14185 1865 aa18.37■□□□□ 0.53
TRIM47-206ENST00000592942 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 CETPP11597 493 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 MCMDC2Q4G0Z9 681 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 VPS53Q5VIR6 699 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 GPAT2Q6NUI2 795 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 GINM1Q9NU53 330 aa18.36■□□□□ 0.53
TRIM47-206ENST00000592942 A0A0G2JLL6 359 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-206ENST00000592942 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 SLC34A2O95436 690 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 ASNSP08243 561 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 CDK8P49336 464 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 SPP2Q13103 211 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 CERKLQ49MI3 558 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-206ENST00000592942 PRRT2Q7Z6L0 340 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-206ENST00000592942 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-206ENST00000592942 WDR18Q9BV38 432 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
TRIM47-206ENST00000592942 ALDH1A1P00352 501 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 GH2P01242 217 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 ARPP21Q9UBL0 812 aaPredicted RBP18.34■□□□□ 0.53
TRIM47-206ENST00000592942 SWAP70Q9UH65 585 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
TRIM47-206ENST00000592942 ATAD5Q96QE3 1844 aa18.33■□□□□ 0.53
TRIM47-206ENST00000592942 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
TRIM47-206ENST00000592942 APPP05067 770 aa18.33■□□□□ 0.52
TRIM47-206ENST00000592942 NEFLP07196 543 aa18.33■□□□□ 0.52
TRIM47-206ENST00000592942 DDRGK1Q96HY6 314 aa18.33■□□□□ 0.52
TRIM47-206ENST00000592942 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
TRIM47-206ENST00000592942 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 CRHR2Q13324 411 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 ALX1Q15699 326 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 ABCB5Q2M3G0 1257 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 OTUD7BQ6GQQ9 843 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 ANKRD23Q86SG2 305 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 SIAH1Q8IUQ4 282 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 IL25Q9H293 177 aa18.32■□□□□ 0.52
TRIM47-206ENST00000592942 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 GPR25O00155 361 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 HSPD1P10809 573 aaKnown RBP18.31■□□□□ 0.52
TRIM47-206ENST00000592942 DGKZQ13574 1117 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
TRIM47-206ENST00000592942 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
TRIM47-206ENST00000592942 ABHD8Q96I13 439 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
TRIM47-206ENST00000592942 TACC3Q9Y6A5 838 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 PTPRFP10586 1907 aa18.31■□□□□ 0.52
TRIM47-206ENST00000592942 FGAP02671 866 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 AKR1B1P15121 316 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 TDO2P48775 406 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 BACE1P56817 501 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 SEPT2Q15019 361 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 ERICH6BQ5W0A0 696 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
TRIM47-206ENST00000592942 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRIM47-206ENST00000592942 NACAP1Q9BZK3 213 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
TRIM47-206ENST00000592942 CCDC171Q6TFL3 1326 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 HIP1O00291 1037 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 PDHXO00330 501 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 RASA1P20936 1047 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 TREML2Q5T2D2 321 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 ZNF296Q8WUU4 475 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-206ENST00000592942 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 NAPBQ9H115 298 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 CABP5Q9NP86 173 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
TRIM47-206ENST00000592942 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 CHMLP26374 656 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 HMGCS2P54868 508 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 PPARAQ07869 468 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 MTMR2Q13614 643 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
TRIM47-206ENST00000592942 TAF1CQ15572 869 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-206ENST00000592942 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms