RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 SMARCE1Q969G3 411 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZNF540-210ENST00000592533 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
ZNF540-210ENST00000592533 ERICH2A1L162 156 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 TDO2P48775 406 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PLCD1P51178 756 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF540-210ENST00000592533 ERCC6LQ2NKX8 1250 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 HOMER1Q86YM7 354 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
ZNF540-210ENST00000592533 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 KCNJ14Q9UNX9 436 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PPP2R2CQ9Y2T4 447 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 MAST2Q6P0Q8 1798 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PRKAB2O43741 272 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 SLFN14P0C7P3 912 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 TC2NQ8N9U0 490 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 UTP14AQ9BVJ6 771 aaKnown RBP13.28□□□□□ -0.28
ZNF540-210ENST00000592533 NFE2L3Q9Y4A8 694 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 COL4A1P02462 1669 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 TADA3O75528 432 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 SUSD4Q5VX71 490 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 MED15Q96RN5 788 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
ZNF540-210ENST00000592533 EFCAB8A8MWE9 144 aa13.27□□□□□ -0.28
ZNF540-210ENST00000592533 PPARAQ07869 468 aa13.27□□□□□ -0.28
ZNF540-210ENST00000592533 NR1I3Q14994 352 aa13.27□□□□□ -0.28
ZNF540-210ENST00000592533 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.28
ZNF540-210ENST00000592533 BAG1Q99933 345 aaPredicted RBP13.27□□□□□ -0.28
ZNF540-210ENST00000592533 A0A1B0GTH6 734 aa13.27□□□□□ -0.29
ZNF540-210ENST00000592533 TPM1P09493 284 aa13.27□□□□□ -0.29
ZNF540-210ENST00000592533 FUT2Q10981 343 aa13.27□□□□□ -0.29
ZNF540-210ENST00000592533 BMS1Q14692 1282 aaKnown RBP13.27□□□□□ -0.29
ZNF540-210ENST00000592533 BMP15O95972 392 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 FGRP09769 529 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 NR5A1Q13285 461 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 CCDC152Q4G0S7 254 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 PHF20Q9BVI0 1012 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 BCL11BQ9C0K0 894 aaPredicted RBP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 ZRANB2O95218 330 aaKnown RBP eCLIP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 CLCN6P51797 869 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 TERF2Q15554 542 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 INTS5Q6P9B9 1019 aaKnown RBP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 PANX2Q96RD6 677 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 SEMA3EO15041 775 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 BCAMP50895 628 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 PKN1Q16512 942 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 ESR2Q92731 530 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 RAI14Q9P0K7 980 aa13.26□□□□□ -0.29
ZNF540-210ENST00000592533 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
ZNF540-210ENST00000592533 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
ZNF540-210ENST00000592533 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 ARHGAP29Q52LW3 1261 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 FERMT2Q96AC1 680 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 CCDC34Q96HJ3 373 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 UBAC1Q9BSL1 405 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 TNKSO95271 1327 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 COL1A1P02452 1464 aaPredicted RBP13.25□□□□□ -0.29
ZNF540-210ENST00000592533 NTSR2O95665 410 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 XBP1P17861 261 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
ZNF540-210ENST00000592533 PBX1P40424 430 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 CUL4BQ13620 913 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 NRAPQ86VF7 1730 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
ZNF540-210ENST00000592533 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
ZNF540-210ENST00000592533 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 ATP8B1O43520 1251 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 CAMTA2O94983 1202 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
ZNF540-210ENST00000592533 CDKAL1Q5VV42 579 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 TNFRSF25Q93038 417 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
ZNF540-210ENST00000592533 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
ZNF540-210ENST00000592533 SNAP23O00161 211 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 GOLGA8FQ08AF8 430 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 GOLGA8DPQ0D2H9 430 aa13.24□□□□□ -0.29
ZNF540-210ENST00000592533 ADGRA1Q86SQ6 560 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms