RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.53	□□□□□ -0.4	2e-7	■■□□□ 12.9
ILF3-208	ENST00000587928	UQCRFS1P1	P0C7P4	283 aa		12.53	□□□□□ -0.4
ILF3-208	ENST00000587928	TRDN	Q13061	729 aa		12.53	□□□□□ -0.4
ILF3-208	ENST00000587928	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.53	□□□□□ -0.4
ILF3-208	ENST00000587928	ACTN4	O43707	911 aa	Known RBP	12.52	□□□□□ -0.4
ILF3-208	ENST00000587928	PARP10	Q53GL7	1025 aa		12.52	□□□□□ -0.4
ILF3-208	ENST00000587928	DZIP3	Q86Y13	1208 aa	Known RBP	12.52	□□□□□ -0.4
ILF3-208	ENST00000587928	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.52	□□□□□ -0.4
ILF3-208	ENST00000587928	LOC102724428	A0A0B4J2F2	783 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	ANKRD18B	A2A2Z9	1011 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	TTC36	A6NLP5	189 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	SIK1	P57059	783 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	DPCR1	Q3MIW9	517 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	ARMCX5	Q6P1M9	558 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	CCAR1	Q8IX12	1150 aa	Known RBP	12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	C10orf67	Q8IYJ2	551 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	ZNF526	Q8TF50	670 aa	Predicted RBP	12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	PHF20	Q9BVI0	1012 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	FAM107B	Q9H098	131 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	DNAJC25	Q9H1X3	360 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	TBC1D2B	Q9UPU7	963 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928		A0A087X0B3	334 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	MMP1	P03956	469 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	EARS2	Q5JPH6	523 aa	Known RBP	12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	METTL24	Q5JXM2	366 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	RCSD1	Q6JBY9	416 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	PTF1A	Q7RTS3	328 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	L2HGDH	Q9H9P8	463 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	PLIN4	Q96Q06	1357 aa		12.52	□□□□□ -0.41
ILF3-208	ENST00000587928	IVL	P07476	585 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	TROAP	Q12815	778 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	ARID5B	Q14865	1188 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	RALYL	Q86SE5	291 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	BSDC1	Q9NW68	430 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	PAXBP1	Q9Y5B6	917 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	SNAP23	O00161	211 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	EDIL3	O43854	480 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	PTGS1	P23219	599 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	GUCY2C	P25092	1073 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	LRMP	Q12912	555 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	E2F4	Q16254	413 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	IMMT	Q16891	758 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	BRIP1	Q9BX63	1249 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	TRMT112	Q9UI30	125 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	USP27X	A6NNY8	438 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	MAP2K2	P36507	400 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	TNMD	Q9H2S6	317 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	KLRG2	A4D1S0	409 aa	Predicted RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	PFKFB1	P16118	471 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	RDX	P35241	583 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	CCT2	P78371	535 aa	Known RBP	12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	STX1A	Q16623	288 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	ANO1	Q5XXA6	986 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	KCNG4	Q8TDN1	519 aa		12.51	□□□□□ -0.41
ILF3-208	ENST00000587928	ADAMTS2	O95450	1211 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	GRIN1	Q05586	938 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	CAMK4	Q16566	473 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	EGFL6	Q8IUX8	553 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	DRC7	Q8IY82	874 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	JRKL	Q9Y4A0	524 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928		V9GYY5	206 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	KLF18	A0A0U1RQI7	1052 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	KIF3C	O14782	793 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	GPT	P24298	496 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	E4F1	Q66K89	784 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	SLC51A	Q86UW1	340 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	CKAP2L	Q8IYA6	745 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	MRPS27	Q92552	414 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	ZBTB9	Q96C00	473 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	DRC1	Q96MC2	740 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	TULP2	O00295	520 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	DHX16	O60231	1041 aa	Known RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	IL17A	Q16552	155 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	SLC9C2	Q5TAH2	1124 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	OTUD7B	Q6GQQ9	843 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	VPS37D	Q86XT2	251 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	FOXP1	Q9H334	677 aa	Predicted RBP	12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	DONSON	Q9NYP3	566 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	CNTNAP5	Q8WYK1	1306 aa		12.5	□□□□□ -0.41
ILF3-208	ENST00000587928	FAM177B	A6PVY3	158 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	PRKAB2	O43741	272 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	PDE4B	Q07343	736 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	GNL2	Q13823	731 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	NBPF9	Q3BBW0	867 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	AKNAD1	Q5T1N1	836 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	CPLX2	Q6PUV4	134 aa	Known RBP	12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	LDHAL6A	Q6ZMR3	332 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	NGLY1	Q96IV0	654 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928		A0A087WWV3	80 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	ORC4	O43929	436 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	PTPRE	P23469	700 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	CHRND	Q07001	517 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	SBK1	Q52WX2	424 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	TRIM65	Q6PJ69	517 aa		12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	FAM84B	Q96KN1	310 aa	Predicted RBP	12.49	□□□□□ -0.41
ILF3-208	ENST00000587928	MPHOSPH8	Q99549	860 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms