RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SHISA4Q96DD7 197 aa22.87■■□□□ 1.25
TRIM47-205ENST00000587774 CERS3Q8IU89 383 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 SLAIN1Q8ND83 568 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 KIF1BPQ96EK5 621 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 WDR18Q9BV38 432 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 ZBTB21Q9ULJ3 1066 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 RLFQ13129 1914 aa22.86■■□□□ 1.25
TRIM47-205ENST00000587774 HMMRO75330 724 aa22.85■■□□□ 1.25
TRIM47-205ENST00000587774 USP5P45974 858 aa22.85■■□□□ 1.25
TRIM47-205ENST00000587774 FLT3LGP49771 235 aa22.85■■□□□ 1.25
TRIM47-205ENST00000587774 PABPC4Q13310 644 aaKnown RBP eCLIP22.85■■□□□ 1.25
TRIM47-205ENST00000587774 CLASRPQ8N2M8 674 aaKnown RBP22.85■■□□□ 1.25
TRIM47-205ENST00000587774 ASCC2Q9H1I8 757 aaPredicted RBP22.85■■□□□ 1.25
TRIM47-205ENST00000587774 COL11A1P12107 1806 aaPredicted RBP22.85■■□□□ 1.25
TRIM47-205ENST00000587774 CCL5P13501 91 aa22.84■■□□□ 1.25
TRIM47-205ENST00000587774 BACE1P56817 501 aa22.84■■□□□ 1.25
TRIM47-205ENST00000587774 TMED8Q6PL24 325 aaPredicted RBP22.84■■□□□ 1.25
TRIM47-205ENST00000587774 BIN2Q9UBW5 565 aaPredicted RBP22.84■■□□□ 1.25
TRIM47-205ENST00000587774 A0A0G2JMZ2 1700 aa22.83■■□□□ 1.25
TRIM47-205ENST00000587774 ADCY3O60266 1144 aa22.83■■□□□ 1.25
TRIM47-205ENST00000587774 ELNP15502 786 aa22.83■■□□□ 1.25
TRIM47-205ENST00000587774 GCLCP48506 637 aaPredicted RBP22.83■■□□□ 1.25
TRIM47-205ENST00000587774 RIOK1Q9BRS2 568 aaKnown RBP22.83■■□□□ 1.25
TRIM47-205ENST00000587774 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
TRIM47-205ENST00000587774 GINM1Q9NU53 330 aa22.83■■□□□ 1.25
TRIM47-205ENST00000587774 UBXN2AP68543 259 aa22.82■■□□□ 1.24
TRIM47-205ENST00000587774 IRF5Q13568 498 aa22.82■■□□□ 1.24
TRIM47-205ENST00000587774 TTF1Q15361 905 aaPredicted RBP22.82■■□□□ 1.24
TRIM47-205ENST00000587774 DNAJC2Q99543 621 aaKnown RBP22.82■■□□□ 1.24
TRIM47-205ENST00000587774 TMOD4Q9NZQ9 345 aa22.82■■□□□ 1.24
TRIM47-205ENST00000587774 RANBP2P49792 3224 aaKnown RBP22.82■■□□□ 1.24
TRIM47-205ENST00000587774 IFIT2P09913 472 aaKnown RBP22.81■■□□□ 1.24
TRIM47-205ENST00000587774 PDE6AP16499 860 aa22.81■■□□□ 1.24
TRIM47-205ENST00000587774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.81■■□□□ 1.24
TRIM47-205ENST00000587774 COA7Q96BR5 231 aa22.81■■□□□ 1.24
TRIM47-205ENST00000587774 RNF208Q9H0X6 261 aa22.81■■□□□ 1.24
TRIM47-205ENST00000587774 EHD4Q9H223 541 aa22.81■■□□□ 1.24
TRIM47-205ENST00000587774 SERPINB13Q9UIV8 391 aa22.81■■□□□ 1.24
TRIM47-205ENST00000587774 ZNFX1Q9P2E3 1918 aaKnown RBP22.8■■□□□ 1.24
TRIM47-205ENST00000587774 USP17L10C9JJH3 530 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 GOLIM4O00461 696 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 GH2P01242 217 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 INHAP05111 366 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 GJB1P08034 283 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 GJA8P48165 433 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 IRX3P78415 501 aaPredicted RBP22.8■■□□□ 1.24
TRIM47-205ENST00000587774 SLC9C2Q5TAH2 1124 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 C20orf194Q5TEA3 1177 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 TATDN1Q6P1N9 297 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 UNC93B1Q9H1C4 597 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 TAOK2Q9UL54 1235 aa22.8■■□□□ 1.24
TRIM47-205ENST00000587774 MYH4Q9Y623 1939 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 MAGEB6P1A0A0J9YX57 407 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 C19orf81C9J6K1 198 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 RAB11FIP3O75154 756 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 HOXA7P31268 230 aaPredicted RBP22.79■■□□□ 1.24
TRIM47-205ENST00000587774 NKX2-3Q8TAU0 364 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 GCC1Q96CN9 775 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 EDC3Q96F86 508 aaKnown RBP22.79■■□□□ 1.24
TRIM47-205ENST00000587774 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
TRIM47-205ENST00000587774 MORF4L1Q9UBU8 362 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 ZNF532Q9HCE3 1301 aa22.79■■□□□ 1.24
TRIM47-205ENST00000587774 TRIOBPQ9H2D6 2365 aa22.78■■□□□ 1.24
TRIM47-205ENST00000587774 TCRBV5S4A2TA0A5A2 114 aa22.78■■□□□ 1.24
TRIM47-205ENST00000587774 GREB1LQ9C091 1923 aaPredicted RBP22.78■■□□□ 1.24
TRIM47-205ENST00000587774 PLCD1P51178 756 aa22.77■■□□□ 1.24
TRIM47-205ENST00000587774 HERVK_113P62684 666 aa22.77■■□□□ 1.24
TRIM47-205ENST00000587774 TTC6Q86TZ1 520 aa22.77■■□□□ 1.24
TRIM47-205ENST00000587774 PEX10O60683 326 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 SHMT1P34896 483 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 EVX2Q03828 476 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 UBE2Q1Q7Z7E8 422 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 LCORLQ8N3X6 602 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 U2AF1L4Q8WU68 220 aaKnown RBP22.76■■□□□ 1.23
TRIM47-205ENST00000587774 P2RX7Q99572 595 aaKnown RBP22.76■■□□□ 1.23
TRIM47-205ENST00000587774 CRNKL1Q9BZJ0 848 aaKnown RBP22.76■■□□□ 1.23
TRIM47-205ENST00000587774 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 EMILIN3Q9NT22 766 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 DNAH12Q6ZR08 3092 aa22.76■■□□□ 1.23
TRIM47-205ENST00000587774 PLXNA1Q9UIW2 1896 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 PDE3AQ14432 1141 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 RAB3GAP1Q15042 981 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 ZYXQ15942 572 aaKnown RBP22.75■■□□□ 1.23
TRIM47-205ENST00000587774 CERKLQ49MI3 558 aaPredicted RBP22.75■■□□□ 1.23
TRIM47-205ENST00000587774 USP17L2Q6R6M4 530 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 SDR42E1Q8WUS8 393 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 FEZ1Q99689 392 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 PAG1Q9NWQ8 432 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 SZT2Q5T011 3432 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 ZNF236Q9UL36 1845 aa22.75■■□□□ 1.23
TRIM47-205ENST00000587774 ABCB5Q2M3G0 1257 aa22.74■■□□□ 1.23
TRIM47-205ENST00000587774 BOLA2Q9H3K6 86 aa22.74■■□□□ 1.23
TRIM47-205ENST00000587774 SGPL1O95470 568 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 POLR3DP05423 398 aaPredicted RBP22.73■■□□□ 1.23
TRIM47-205ENST00000587774 ATP5JP18859 108 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 GABPAQ06546 454 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 SLFNL1Q499Z3 407 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 C12orf42Q96LP6 360 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms