RNA–Protein interactions for RNA: ENST00000587597.5

RTN2-204, Transcript of reticulon 2, humanhuman

TSL 5

Gene RTN2, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-204ENST00000587597 KIAA0825Q8IV33 1275 aa28.64■■■□□ 2.18
RTN2-204ENST00000587597 SLF2Q8IX21 1173 aa28.64■■■□□ 2.18
RTN2-204ENST00000587597 PHKBQ93100 1093 aa28.64■■■□□ 2.18
RTN2-204ENST00000587597 SUGT1Q9Y2Z0 365 aa28.64■■■□□ 2.18
RTN2-204ENST00000587597 ERICH2A1L162 156 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 YDJCA8MPS7 323 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 ORC4O43929 436 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 ATL3Q6DD88 541 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 FBXO18Q8NFZ0 1043 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 NTRK3Q16288 839 aa28.63■■■□□ 2.17
RTN2-204ENST00000587597 ZNF396Q96N95 335 aaPredicted RBP28.63■■■□□ 2.17
RTN2-204ENST00000587597 PPIP5K2O43314 1243 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 SYNE3Q6ZMZ3 975 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 MAP7D2Q96T17 732 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 NID2Q14112 1375 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 STRIP1Q5VSL9 837 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 CC2D2BQ6DHV5 1058 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 RGS22Q8NE09 1264 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 AIFM3Q96NN9 605 aa28.62■■■□□ 2.17
RTN2-204ENST00000587597 DDX60LQ5H9U9 1706 aaKnown RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 POLR3DP05423 398 aaPredicted RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 PCP11498 1178 aaKnown RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 CMTR1Q8N1G2 835 aaKnown RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 KLHL34Q8N239 644 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 DDX4Q9NQI0 724 aaKnown RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 MYH1P12882 1939 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 MSNP26038 577 aaKnown RBP28.61■■■□□ 2.17
RTN2-204ENST00000587597 PDE4BQ07343 736 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 PICALMQ13492 652 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 ZNF654Q8IZM8 581 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 MTFR1LQ9H019 292 aa28.61■■■□□ 2.17
RTN2-204ENST00000587597 ECM29Q5VYK3 1845 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 PLCG2P16885 1265 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 APOBEC3HQ6NTF7 200 aaKnown RBP28.6■■■□□ 2.17
RTN2-204ENST00000587597 TMTC2Q8N394 836 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 NUP133Q8WUM0 1156 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 ZNF277Q9NRM2 450 aaPredicted RBP28.6■■■□□ 2.17
RTN2-204ENST00000587597 PPP1R1BQ9UD71 204 aaPredicted RBP28.6■■■□□ 2.17
RTN2-204ENST00000587597 TAOK2Q9UL54 1235 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 COL4A5P29400 1685 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 FOCADQ5VW36 1801 aa28.6■■■□□ 2.17
RTN2-204ENST00000587597 SLC3A2P08195 630 aaKnown RBP28.59■■■□□ 2.17
RTN2-204ENST00000587597 LIG1P18858 919 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 CCDC93Q567U6 631 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 PGBD1Q96JS3 809 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 PSDA5PKW4 1024 aaPredicted RBP28.59■■■□□ 2.17
RTN2-204ENST00000587597 USP17L3A6NCW0 530 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 USP17L4A6NCW7 530 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 CEBPZQ03701 1054 aaKnown RBP28.59■■■□□ 2.17
RTN2-204ENST00000587597 USP17L1Q7RTZ2 530 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 IQCA1Q86XH1 822 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 USP28Q96RU2 1077 aa28.59■■■□□ 2.17
RTN2-204ENST00000587597 WDHD1O75717 1129 aaPredicted RBP28.58■■■□□ 2.17
RTN2-204ENST00000587597 CCDC82Q8N4S0 544 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 RCOR1Q9UKL0 485 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 ROBO3Q96MS0 1386 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 SRCAPQ6ZRS2 3230 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 TSPY2A6NKD2 308 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 IARSP41252 1262 aaKnown RBP28.58■■■□□ 2.17
RTN2-204ENST00000587597 CRKP46108 304 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 CDC42EP5Q6NZY7 148 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 CERS3Q8IU89 383 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 BICD2Q8TD16 824 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 UPF1Q92900 1129 aaKnown RBP eCLIP28.58■■■□□ 2.17
RTN2-204ENST00000587597 ALG1Q9BT22 464 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 FTOQ9C0B1 505 aaKnown RBP eCLIP28.58■■■□□ 2.17
RTN2-204ENST00000587597 USP40Q9NVE5 1235 aa28.58■■■□□ 2.17
RTN2-204ENST00000587597 TFAP4Q01664 338 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 IFIT1BQ5T764 474 aaKnown RBP28.57■■■□□ 2.16
RTN2-204ENST00000587597 RNF214Q8ND24 703 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 TEKT1Q969V4 418 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 IL17RBQ9NRM6 502 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 RCAN1P53805 252 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 HHIPL2Q6UWX4 724 aa28.57■■■□□ 2.16
RTN2-204ENST00000587597 STK36Q9NRP7 1315 aa28.56■■■□□ 2.16
RTN2-204ENST00000587597 BRAPQ7Z569 592 aa28.56■■■□□ 2.16
RTN2-204ENST00000587597 SUPT20HQ8NEM7 779 aa28.56■■■□□ 2.16
RTN2-204ENST00000587597 POLD1P28340 1107 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 RTN1Q16799 776 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 RCSD1Q6JBY9 416 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 FANCBQ8NB91 859 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 NUP62CLQ9H1M0 184 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 MKNK2Q9HBH9 465 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 CACNB3P54284 484 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 NFIAQ12857 509 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 DDX19AQ9NUU7 478 aaKnown RBP28.55■■■□□ 2.16
RTN2-204ENST00000587597 DACT1Q9NYF0 836 aa28.55■■■□□ 2.16
RTN2-204ENST00000587597 AMOTL1Q8IY63 956 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 PIM2Q9P1W9 311 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 IFNAR1P17181 557 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 RASA1P20936 1047 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 GUCY1A2P33402 732 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 KIF23Q02241 960 aaPredicted RBP28.54■■■□□ 2.16
RTN2-204ENST00000587597 PSMD1Q99460 953 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 SGIP1Q9BQI5 828 aa28.54■■■□□ 2.16
RTN2-204ENST00000587597 SLURP2P0DP57 97 aa28.53■■■□□ 2.16
RTN2-204ENST00000587597 CDK8P49336 464 aa28.53■■■□□ 2.16
RTN2-204ENST00000587597 TGFB2P61812 414 aa28.53■■■□□ 2.16
RTN2-204ENST00000587597 SSRP1Q08945 709 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms