RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GCLCP48506 637 aaPredicted RBP24.85■■□□□ 1.57
TOP3A-219ENST00000584887 SH3D19Q5HYK7 790 aa24.85■■□□□ 1.57
TOP3A-219ENST00000584887 CERS3Q8IU89 383 aa24.85■■□□□ 1.57
TOP3A-219ENST00000584887 CLASRPQ8N2M8 674 aaKnown RBP24.85■■□□□ 1.57
TOP3A-219ENST00000584887 GCC1Q96CN9 775 aa24.85■■□□□ 1.57
TOP3A-219ENST00000584887 SHISA4Q96DD7 197 aa24.85■■□□□ 1.57
TOP3A-219ENST00000584887 IFIT2P09913 472 aaKnown RBP24.84■■□□□ 1.57
TOP3A-219ENST00000584887 BACE1P56817 501 aa24.84■■□□□ 1.57
TOP3A-219ENST00000584887 METTL16Q86W50 562 aaKnown RBP24.84■■□□□ 1.57
TOP3A-219ENST00000584887 RPAP2Q8IXW5 612 aaPredicted RBP24.84■■□□□ 1.57
TOP3A-219ENST00000584887 NKX2-3Q8TAU0 364 aa24.84■■□□□ 1.57
TOP3A-219ENST00000584887 KIF1BPQ96EK5 621 aa24.84■■□□□ 1.57
TOP3A-219ENST00000584887 DNAJC2Q99543 621 aaKnown RBP24.84■■□□□ 1.57
TOP3A-219ENST00000584887 UNC93B1Q9H1C4 597 aa24.84■■□□□ 1.57
TOP3A-219ENST00000584887 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
TOP3A-219ENST00000584887 MYH1P12882 1939 aa24.83■■□□□ 1.57
TOP3A-219ENST00000584887 INHAP05111 366 aa24.83■■□□□ 1.57
TOP3A-219ENST00000584887 ZBTB40Q9NUA8 1239 aa24.83■■□□□ 1.57
TOP3A-219ENST00000584887 DOCK3Q8IZD9 2030 aa24.83■■□□□ 1.56
TOP3A-219ENST00000584887 CEP290O15078 2479 aa24.82■■□□□ 1.56
TOP3A-219ENST00000584887 GH2P01242 217 aa24.82■■□□□ 1.56
TOP3A-219ENST00000584887 GJB1P08034 283 aa24.82■■□□□ 1.56
TOP3A-219ENST00000584887 TTF1Q15361 905 aaPredicted RBP24.82■■□□□ 1.56
TOP3A-219ENST00000584887 GINM1Q9NU53 330 aa24.82■■□□□ 1.56
TOP3A-219ENST00000584887 MAGEB6P1A0A0J9YX57 407 aa24.81■■□□□ 1.56
TOP3A-219ENST00000584887 USP17L10C9JJH3 530 aa24.81■■□□□ 1.56
TOP3A-219ENST00000584887 GOLIM4O00461 696 aa24.81■■□□□ 1.56
TOP3A-219ENST00000584887 GJA8P48165 433 aa24.81■■□□□ 1.56
TOP3A-219ENST00000584887 SIRT2Q8IXJ6 389 aa24.81■■□□□ 1.56
TOP3A-219ENST00000584887 MKI67P46013 3256 aaKnown RBP24.8■■□□□ 1.56
TOP3A-219ENST00000584887 C19orf81C9J6K1 198 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 PDE6AP16499 860 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 IRF5Q13568 498 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 SLC9C2Q5TAH2 1124 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 TTC6Q86TZ1 520 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 FEZ1Q99689 392 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
TOP3A-219ENST00000584887 SERPINB13Q9UIV8 391 aa24.8■■□□□ 1.56
TOP3A-219ENST00000584887 ZYXQ15942 572 aaKnown RBP24.79■■□□□ 1.56
TOP3A-219ENST00000584887 TMED8Q6PL24 325 aaPredicted RBP24.79■■□□□ 1.56
TOP3A-219ENST00000584887 PXYLP1Q8TE99 480 aa24.79■■□□□ 1.56
TOP3A-219ENST00000584887 U2AF1L4Q8WU68 220 aaKnown RBP24.79■■□□□ 1.56
TOP3A-219ENST00000584887 P2RX7Q99572 595 aaKnown RBP24.79■■□□□ 1.56
TOP3A-219ENST00000584887 PEX10O60683 326 aa24.78■■□□□ 1.56
TOP3A-219ENST00000584887 RAB11FIP3O75154 756 aa24.78■■□□□ 1.56
TOP3A-219ENST00000584887 POLR3DP05423 398 aaPredicted RBP24.78■■□□□ 1.56
TOP3A-219ENST00000584887 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
TOP3A-219ENST00000584887 RIOK1Q9BRS2 568 aaKnown RBP24.78■■□□□ 1.56
TOP3A-219ENST00000584887 CRNKL1Q9BZJ0 848 aaKnown RBP24.78■■□□□ 1.56
TOP3A-219ENST00000584887 FARP2O94887 1054 aaPredicted RBP24.77■■□□□ 1.56
TOP3A-219ENST00000584887 HOXA7P31268 230 aaPredicted RBP24.77■■□□□ 1.56
TOP3A-219ENST00000584887 HERVK_113P62684 666 aa24.77■■□□□ 1.56
TOP3A-219ENST00000584887 HABP4Q5JVS0 413 aaKnown RBP24.77■■□□□ 1.56
TOP3A-219ENST00000584887 USP17L2Q6R6M4 530 aa24.77■■□□□ 1.56
TOP3A-219ENST00000584887 DPF3Q92784 378 aa24.77■■□□□ 1.56
TOP3A-219ENST00000584887 EDC3Q96F86 508 aaKnown RBP24.77■■□□□ 1.56
TOP3A-219ENST00000584887 EHD4Q9H223 541 aa24.77■■□□□ 1.56
TOP3A-219ENST00000584887 ZNF532Q9HCE3 1301 aa24.77■■□□□ 1.56
TOP3A-219ENST00000584887 CERKLQ49MI3 558 aaPredicted RBP24.76■■□□□ 1.55
TOP3A-219ENST00000584887 DEFB118Q96PH6 123 aa24.76■■□□□ 1.55
TOP3A-219ENST00000584887 PAGR1Q9BTK6 254 aa24.76■■□□□ 1.55
TOP3A-219ENST00000584887 MORF4L1Q9UBU8 362 aa24.76■■□□□ 1.55
TOP3A-219ENST00000584887 BRCA2P51587 3418 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 H0YGN5 161 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 ABCB5Q2M3G0 1257 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 C20orf194Q5TEA3 1177 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 TATDN1Q6P1N9 297 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 GPRC5AQ8NFJ5 357 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.75■■□□□ 1.55
TOP3A-219ENST00000584887 BOLA2Q9H3K6 86 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 TXNRD2Q9NNW7 524 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 CABP5Q9NP86 173 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 EMILIN3Q9NT22 766 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 MCM9Q9NXL9 1143 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 NAV1Q8NEY1 1877 aa24.75■■□□□ 1.55
TOP3A-219ENST00000584887 SGPL1O95470 568 aa24.74■■□□□ 1.55
TOP3A-219ENST00000584887 TFRCP02786 760 aaKnown RBP24.74■■□□□ 1.55
TOP3A-219ENST00000584887 PLCD1P51178 756 aa24.74■■□□□ 1.55
TOP3A-219ENST00000584887 CCAR1Q8IX12 1150 aaKnown RBP24.74■■□□□ 1.55
TOP3A-219ENST00000584887 LCORLQ8N3X6 602 aa24.73■■□□□ 1.55
TOP3A-219ENST00000584887 HTATIP2Q9BUP3 242 aa24.73■■□□□ 1.55
TOP3A-219ENST00000584887 PAG1Q9NWQ8 432 aa24.73■■□□□ 1.55
TOP3A-219ENST00000584887 HMGCRP04035 888 aa24.72■■□□□ 1.55
TOP3A-219ENST00000584887 SHMT1P34896 483 aa24.72■■□□□ 1.55
TOP3A-219ENST00000584887 SDR42E1Q8WUS8 393 aa24.72■■□□□ 1.55
TOP3A-219ENST00000584887 GJD2Q9UKL4 321 aa24.72■■□□□ 1.55
TOP3A-219ENST00000584887 TCRBV5S4A2TA0A5A2 114 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 MPHOSPH10O00566 681 aaKnown RBP24.71■■□□□ 1.55
TOP3A-219ENST00000584887 CYP2B6P20813 491 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 PDE3AQ14432 1141 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 ACER1Q8TDN7 264 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.71■■□□□ 1.55
TOP3A-219ENST00000584887 ARMT1Q9H993 441 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 CWC22Q9HCG8 908 aaKnown RBP24.71■■□□□ 1.55
TOP3A-219ENST00000584887 RBPJLQ9UBG7 517 aa24.71■■□□□ 1.55
TOP3A-219ENST00000584887 DDX60LQ5H9U9 1706 aaKnown RBP24.7■■□□□ 1.54
TOP3A-219ENST00000584887 MBD4O95243 580 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 CYP2D6P10635 497 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 USP14P54578 494 aa24.7■■□□□ 1.54
TOP3A-219ENST00000584887 ERVK-9P63128 1117 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms