RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ADD2P35612 726 aa30.03■■■□□ 2.4
TSEN54-209ENST00000583454 DYNLL1P63167 89 aaKnown RBP30.03■■■□□ 2.4
TSEN54-209ENST00000583454 GADL1Q6ZQY3 521 aa30.03■■■□□ 2.4
TSEN54-209ENST00000583454 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.03■■■□□ 2.4
TSEN54-209ENST00000583454 TRIM75PA6NK02 468 aa30.02■■■□□ 2.4
TSEN54-209ENST00000583454 CENPBP07199 599 aaPredicted RBP30.02■■■□□ 2.4
TSEN54-209ENST00000583454 KBTBD3Q8NAB2 608 aa30.02■■■□□ 2.4
TSEN54-209ENST00000583454 MIGA1Q8NAN2 632 aa30.02■■■□□ 2.4
TSEN54-209ENST00000583454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.02■■■□□ 2.4
TSEN54-209ENST00000583454 MYPNQ86TC9 1320 aa30.01■■■□□ 2.4
TSEN54-209ENST00000583454 FMNL1O95466 1100 aaPredicted RBP30.01■■■□□ 2.39
TSEN54-209ENST00000583454 MTFR1Q15390 333 aa30.01■■■□□ 2.39
TSEN54-209ENST00000583454 SLC4A8Q2Y0W8 1093 aa30.01■■■□□ 2.39
TSEN54-209ENST00000583454 RIOK1Q9BRS2 568 aaKnown RBP30.01■■■□□ 2.39
TSEN54-209ENST00000583454 UBE3CQ15386 1083 aa30■■■□□ 2.39
TSEN54-209ENST00000583454 ZSCAN25Q6NSZ9 544 aa30■■■□□ 2.39
TSEN54-209ENST00000583454 PRKCZQ05513 592 aa29.99■■■□□ 2.39
TSEN54-209ENST00000583454 TREML2Q5T2D2 321 aa29.99■■■□□ 2.39
TSEN54-209ENST00000583454 AGTPBP1Q9UPW5 1226 aa29.99■■■□□ 2.39
TSEN54-209ENST00000583454 MAGEB6P1A0A0J9YX57 407 aa29.98■■■□□ 2.39
TSEN54-209ENST00000583454 HOXD10P28358 340 aa29.98■■■□□ 2.39
TSEN54-209ENST00000583454 CAP2P40123 477 aa29.98■■■□□ 2.39
TSEN54-209ENST00000583454 TGFBRAP1Q8WUH2 860 aa29.98■■■□□ 2.39
TSEN54-209ENST00000583454 SHISA4Q96DD7 197 aa29.98■■■□□ 2.39
TSEN54-209ENST00000583454 MYH1P12882 1939 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 GRK4P32298 578 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 FCGRTP55899 365 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 SLFNL1Q499Z3 407 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 PLEKHM2Q8IWE5 1019 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 OSBPL3Q9H4L5 887 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 HERC5Q9UII4 1024 aaKnown RBP29.97■■■□□ 2.39
TSEN54-209ENST00000583454 GABRQQ9UN88 632 aa29.97■■■□□ 2.39
TSEN54-209ENST00000583454 CHGBP05060 677 aa29.96■■■□□ 2.39
TSEN54-209ENST00000583454 RAET1EQ8TD07 263 aa29.96■■■□□ 2.39
TSEN54-209ENST00000583454 DNAJC18Q9H819 358 aa29.96■■■□□ 2.39
TSEN54-209ENST00000583454 FLT1P17948 1338 aa29.96■■■□□ 2.39
TSEN54-209ENST00000583454 SPP2Q13103 211 aa29.95■■■□□ 2.39
TSEN54-209ENST00000583454 METTL16Q86W50 562 aaKnown RBP29.95■■■□□ 2.39
TSEN54-209ENST00000583454 MAPKAPK5Q8IW41 473 aa29.95■■■□□ 2.39
TSEN54-209ENST00000583454 PROCA1Q8NCQ7 364 aaPredicted RBP29.95■■■□□ 2.39
TSEN54-209ENST00000583454 ZNF280CQ8ND82 737 aa29.95■■■□□ 2.39
TSEN54-209ENST00000583454 JAG1P78504 1218 aa29.94■■■□□ 2.38
TSEN54-209ENST00000583454 PI4KBQ9UBF8 816 aa29.94■■■□□ 2.38
TSEN54-209ENST00000583454 RNF113AO15541 343 aaKnown RBP29.93■■■□□ 2.38
TSEN54-209ENST00000583454 ZFYP08048 801 aaPredicted RBP29.93■■■□□ 2.38
TSEN54-209ENST00000583454 DHX36Q9H2U1 1008 aaKnown RBP29.93■■■□□ 2.38
TSEN54-209ENST00000583454 LCORLQ8N3X6 602 aa29.92■■■□□ 2.38
TSEN54-209ENST00000583454 SMCR8Q8TEV9 937 aaPredicted RBP29.92■■■□□ 2.38
TSEN54-209ENST00000583454 TBC1D2Q9BYX2 928 aa29.92■■■□□ 2.38
TSEN54-209ENST00000583454 USP17L5A8MUK1 530 aa29.91■■■□□ 2.38
TSEN54-209ENST00000583454 HMGCS2P54868 508 aa29.91■■■□□ 2.38
TSEN54-209ENST00000583454 SHROOM1Q2M3G4 852 aaPredicted RBP29.91■■■□□ 2.38
TSEN54-209ENST00000583454 LRRFIP1Q32MZ4 808 aaKnown RBP29.91■■■□□ 2.38
TSEN54-209ENST00000583454 SH3D19Q5HYK7 790 aa29.91■■■□□ 2.38
TSEN54-209ENST00000583454 CRNKL1Q9BZJ0 848 aaKnown RBP29.91■■■□□ 2.38
TSEN54-209ENST00000583454 PLXNB2O15031 1838 aa29.91■■■□□ 2.38
TSEN54-209ENST00000583454 DDX60LQ5H9U9 1706 aaKnown RBP29.91■■■□□ 2.38
TSEN54-209ENST00000583454 RANBP2P49792 3224 aaKnown RBP29.9■■■□□ 2.38
TSEN54-209ENST00000583454 CCL5P13501 91 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 PDE4AP27815 886 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 USP5P45974 858 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 ANKRD13CQ8N6S4 541 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 EVI5LQ96CN4 794 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 PUS7LQ9H0K6 701 aaKnown RBP29.9■■■□□ 2.38
TSEN54-209ENST00000583454 ARMT1Q9H993 441 aa29.9■■■□□ 2.38
TSEN54-209ENST00000583454 MBD4O95243 580 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 NEFLP07196 543 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 FLT3LGP49771 235 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 FAM110CQ1W6H9 321 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 SLAIN1Q8ND83 568 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 APPBP2Q92624 585 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 FSD1Q9BTV5 496 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 WDR18Q9BV38 432 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 PALD1Q9ULE6 856 aa29.89■■■□□ 2.38
TSEN54-209ENST00000583454 GJB1P08034 283 aa29.88■■■□□ 2.37
TSEN54-209ENST00000583454 UBE2Q1Q7Z7E8 422 aa29.88■■■□□ 2.37
TSEN54-209ENST00000583454 TICAM2Q86XR7 235 aa29.88■■■□□ 2.37
TSEN54-209ENST00000583454 OSBP2Q969R2 916 aa29.88■■■□□ 2.37
TSEN54-209ENST00000583454 PNMA3Q9UL41 463 aa29.88■■■□□ 2.37
TSEN54-209ENST00000583454 GJA8P48165 433 aa29.87■■■□□ 2.37
TSEN54-209ENST00000583454 IRF5Q13568 498 aa29.87■■■□□ 2.37
TSEN54-209ENST00000583454 SAP30BPQ9UHR5 308 aaKnown RBP29.87■■■□□ 2.37
TSEN54-209ENST00000583454 TNPO2O14787 897 aaKnown RBP29.86■■■□□ 2.37
TSEN54-209ENST00000583454 ADCY3O60266 1144 aa29.86■■■□□ 2.37
TSEN54-209ENST00000583454 HABP4Q5JVS0 413 aaKnown RBP29.86■■■□□ 2.37
TSEN54-209ENST00000583454 FOXP4Q8IVH2 680 aaPredicted RBP29.86■■■□□ 2.37
TSEN54-209ENST00000583454 ASCC2Q9H1I8 757 aaPredicted RBP29.86■■■□□ 2.37
TSEN54-209ENST00000583454 ASNSP08243 561 aa29.85■■■□□ 2.37
TSEN54-209ENST00000583454 ELNP15502 786 aa29.85■■■□□ 2.37
TSEN54-209ENST00000583454 STRBPQ96SI9 672 aaKnown RBP29.85■■■□□ 2.37
TSEN54-209ENST00000583454 RNF208Q9H0X6 261 aa29.85■■■□□ 2.37
TSEN54-209ENST00000583454 UNC93B1Q9H1C4 597 aa29.85■■■□□ 2.37
TSEN54-209ENST00000583454 PRKAB2O43741 272 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 UBXN2AP68543 259 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 MTMR2Q13614 643 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 ZMYM1Q5SVZ6 1142 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 CENPQQ7L2Z9 268 aaPredicted RBP29.84■■■□□ 2.37
TSEN54-209ENST00000583454 PXYLP1Q8TE99 480 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 SDR42E1Q8WUS8 393 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 AS3MTQ9HBK9 375 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms