RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-214ENST00000582981 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 NAPBQ9H115 298 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 DONSONQ9NYP3 566 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 SLC12A7Q9Y666 1083 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 ZMYM6O95789 1325 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 ABL1P00519 1130 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 TUBB4AP04350 444 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 CDC25AP30304 524 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 ADD2P35612 726 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 TXLNAP40222 546 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 TCIRG1Q13488 830 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 FBXW10Q5XX13 1052 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 HDXQ7Z353 690 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 RABGGTAQ92696 567 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MED15Q96RN5 788 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MRPL44Q9H9J2 332 aaKnown RBP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 WNT7AO00755 349 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 ERLIN2O94905 339 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 EVX2Q03828 476 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 SDR42E1Q8WUS8 393 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 MAP3K14Q99558 947 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 BAG1Q99933 345 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-214ENST00000582981 HINFPQ9BQA5 517 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 FAM204AQ9H8W3 233 aa11.94□□□□□ -0.5
TOP3A-214ENST00000582981 C1orf167Q5SNV9 1468 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 CCT6AP40227 531 aaKnown RBP11.93□□□□□ -0.5
TOP3A-214ENST00000582981 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
TOP3A-214ENST00000582981 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
TOP3A-214ENST00000582981 TTLL11Q8NHH1 800 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 ARFGEF2Q9Y6D5 1785 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 ABCC6O95255 1503 aa11.93□□□□□ -0.5
TOP3A-214ENST00000582981 NTRK3Q16288 839 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■■■□ 21.2
TOP3A-214ENST00000582981 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 GPR108Q9NPR9 543 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 ABCF2Q9UG63 623 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 TUBE1Q9UJT0 475 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 HPSEQ9Y251 543 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 NWD2Q9ULI1 1742 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 SSRP1Q08945 709 aaKnown RBP11.92□□□□□ -0.5
TOP3A-214ENST00000582981 POSTNQ15063 836 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-214ENST00000582981 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 TFR2Q9UP52 801 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 IRS4O14654 1257 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-214ENST00000582981 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 TMEM139Q8IV31 216 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
TOP3A-214ENST00000582981 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
TOP3A-214ENST00000582981 A0A087X0B3 334 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 ERLIN1O75477 346 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 ZFYP08048 801 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 KRI1Q8N9T8 703 aaKnown RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 TC2NQ8N9U0 490 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 KAT2BQ92831 832 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 JPH2Q9BR39 696 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 CSRNP2Q9H175 543 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 A0A087WUV0 522 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 PES1O00541 588 aaKnown RBP11.91□□□□□ -0.5
TOP3A-214ENST00000582981 MAP2K7O14733 419 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 BCAMP50895 628 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 BRD3Q15059 726 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 NOSTRINQ8IVI9 506 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms