RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OTUD7BQ6GQQ9 843 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 CCDC73Q6ZRK6 1079 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 SLF2Q8IX21 1173 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 RNF214Q8ND24 703 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 JAG2Q9Y219 1238 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.28■■□□□ 1.8
CCDC47-204ENST00000582252 IFIT1BQ5T764 474 aaKnown RBP26.27■■□□□ 1.8
CCDC47-204ENST00000582252 KRT40Q6A162 431 aa26.27■■□□□ 1.8
CCDC47-204ENST00000582252 CATIPQ7Z7H3 387 aa26.27■■□□□ 1.8
CCDC47-204ENST00000582252 TBC1D22AQ8WUA7 517 aa26.27■■□□□ 1.8
CCDC47-204ENST00000582252 FUCA2Q9BTY2 467 aa26.27■■□□□ 1.8
CCDC47-204ENST00000582252 FAM205AQ6ZU69 1335 aa26.27■■□□□ 1.8
CCDC47-204ENST00000582252 USP5P45974 858 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 PPP4CP60510 307 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 KIAA2012Q0VF49 1180 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 STK38Q15208 465 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 FANCBQ8NB91 859 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 NAV1Q8NEY1 1877 aa26.26■■□□□ 1.79
CCDC47-204ENST00000582252 CYP2D7A0A087X1C5 515 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 DEXIO95424 95 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 ME1P48163 572 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 SF3A1Q15459 793 aaKnown RBP26.25■■□□□ 1.79
CCDC47-204ENST00000582252 RBM28Q9NW13 759 aaKnown RBP26.25■■□□□ 1.79
CCDC47-204ENST00000582252 MROH7-TTC4A0A0A0MT08 1334 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 CTAGE5O15320 804 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 SAFBQ15424 915 aaKnown RBP eCLIP26.25■■□□□ 1.79
CCDC47-204ENST00000582252 PODNQ7Z5L7 613 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 CCAR1Q8IX12 1150 aaKnown RBP26.25■■□□□ 1.79
CCDC47-204ENST00000582252 NUP133Q8WUM0 1156 aa26.25■■□□□ 1.79
CCDC47-204ENST00000582252 SCN9AQ15858 1988 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 PSME4Q14997 1843 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 POLR3DP05423 398 aaPredicted RBP26.24■■□□□ 1.79
CCDC47-204ENST00000582252 RBM43Q6ZSC3 357 aaKnown RBP26.24■■□□□ 1.79
CCDC47-204ENST00000582252 ENAHQ8N8S7 591 aaPredicted RBP26.24■■□□□ 1.79
CCDC47-204ENST00000582252 PDLIM2Q96JY6 352 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 VPS33BQ9H267 617 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 MYH6P13533 1939 aa26.24■■□□□ 1.79
CCDC47-204ENST00000582252 NR1I2O75469 434 aa26.23■■□□□ 1.79
CCDC47-204ENST00000582252 DDAH1O94760 285 aa26.23■■□□□ 1.79
CCDC47-204ENST00000582252 PLCG2P16885 1265 aa26.23■■□□□ 1.79
CCDC47-204ENST00000582252 DOK7Q18PE1 504 aa26.23■■□□□ 1.79
CCDC47-204ENST00000582252 LINC00301Q8NCQ3 95 aa26.23■■□□□ 1.79
CCDC47-204ENST00000582252 FTOQ9C0B1 505 aaKnown RBP eCLIP26.23■■□□□ 1.79
CCDC47-204ENST00000582252 A0A1W2PQ27 194 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 A0A1W2PQ64 194 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 A0A1W2PQD8 194 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 PPIP5K2O43314 1243 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 AKAP17AQ02040 695 aaKnown RBP26.22■■□□□ 1.79
CCDC47-204ENST00000582252 ADALQ6DHV7 355 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 CRACR2BQ8N4Y2 399 aaPredicted RBP26.22■■□□□ 1.79
CCDC47-204ENST00000582252 NLGN2Q8NFZ4 835 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 RNF26Q9BY78 433 aaPredicted RBP26.22■■□□□ 1.79
CCDC47-204ENST00000582252 BCS1LQ9Y276 419 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 AOC3Q16853 763 aa26.22■■□□□ 1.79
CCDC47-204ENST00000582252 KIF28PB7ZC32 967 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 XBP1P17861 261 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 U2AF2P26368 475 aaKnown RBP eCLIP26.21■■□□□ 1.791e-6■■■■□ 21
CCDC47-204ENST00000582252 HS1BP3Q53T59 392 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 CCDC178Q5BJE1 867 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 ANO1Q5XXA6 986 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 AIFM3Q96NN9 605 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 DBNDD1Q9H9R9 158 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 ROBO3Q96MS0 1386 aa26.21■■□□□ 1.79
CCDC47-204ENST00000582252 ZNF646O15015 1829 aaPredicted RBP26.21■■□□□ 1.79
CCDC47-204ENST00000582252 SPTLC2O15270 562 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 ECE2O60344 883 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 KINO60870 393 aaKnown RBP26.2■■□□□ 1.79
CCDC47-204ENST00000582252 PRDM1O75626 825 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 GTF2IP78347 998 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 FAM160A1Q05DH4 1040 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 CAMK4Q16566 473 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 MFSD14BQ5SR56 506 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 NBPF11Q86T75 865 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 MRPS27Q92552 414 aaKnown RBP26.2■■□□□ 1.79
CCDC47-204ENST00000582252 GJB4Q9NTQ9 266 aa26.2■■□□□ 1.79
CCDC47-204ENST00000582252 C12orf60Q5U649 245 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 SASS6Q6UVJ0 657 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 JMYQ8N9B5 988 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 SH3RF3Q8TEJ3 882 aaPredicted RBP26.19■■□□□ 1.78
CCDC47-204ENST00000582252 FHDC1Q9C0D6 1143 aaPredicted RBP26.19■■□□□ 1.78
CCDC47-204ENST00000582252 MKRN1Q9UHC7 482 aaKnown RBP26.19■■□□□ 1.78
CCDC47-204ENST00000582252 PCDHA7Q9UN72 937 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 SUGT1Q9Y2Z0 365 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 CLIC4Q9Y696 253 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 TSPY2A6NKD2 308 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 FSIP1Q8NA03 581 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 TAOK3Q9H2K8 898 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 ZNF287Q9HBT7 754 aa26.19■■□□□ 1.78
CCDC47-204ENST00000582252 MMP1P03956 469 aa26.18■■□□□ 1.78
CCDC47-204ENST00000582252 TYRO3Q06418 890 aa26.18■■□□□ 1.78
CCDC47-204ENST00000582252 DIXDC1Q155Q3 683 aa26.18■■□□□ 1.78
CCDC47-204ENST00000582252 FAM163AQ96GL9 167 aaPredicted RBP26.18■■□□□ 1.78
CCDC47-204ENST00000582252 CDK5RAP2Q96SN8 1893 aa26.18■■□□□ 1.78
CCDC47-204ENST00000582252 SMIM22K7EJ46 135 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 CAVIN2O95810 425 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.17■■□□□ 1.78
CCDC47-204ENST00000582252 GPR75-ASB3A0A0A6YYF3 556 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 USP17L8P0C7I0 530 aa26.17■■□□□ 1.78
CCDC47-204ENST00000582252 CYP2D6P10635 497 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms