RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 ZSWIM4Q9H7M6 989 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 BIN2Q9UBW5 565 aaPredicted RBP4.78□□□□□ -1.64
RTTN-206ENST00000581161 CEP83Q9Y592 693 aa4.78□□□□□ -1.64
RTTN-206ENST00000581161 GRM8O00222 908 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CHGBP05060 677 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 DHX40Q8IX18 779 aaKnown RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 SMARCC1Q92922 1105 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 GOPCQ9HD26 462 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CWC25Q9NXE8 425 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 MORC2Q9Y6X9 1032 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 EFCAB14O75071 495 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CCZ1BP86790 482 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CCZ1P86791 482 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 CETN1Q12798 172 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CCDC178Q5BJE1 867 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 KIF6Q6ZMV9 814 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 SDCCAG8Q86SQ7 713 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 PDCD7Q8N8D1 485 aaKnown RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 JMYQ8N9B5 988 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 NEK11Q8NG66 645 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ZNF526Q8TF50 670 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 EPSTI1Q96J88 318 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 C8orf76Q96K31 380 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 PNMA2Q9UL42 364 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 TAF5LO75529 589 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 SP100P23497 879 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 MARCKSP29966 332 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 ALDH3A1P30838 453 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CLCN6P51797 869 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 NBPF6Q5VWK0 638 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 CACNA2D3Q8IZS8 1091 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 KCNH5Q8NCM2 988 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 NBPF4Q96M43 638 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 BCL9O00512 1426 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 BICDL2A1A5D9 508 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 SASH1O94885 1247 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 SLFN14P0C7P3 912 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 TOP1P11387 765 aaKnown RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 CASQ1P31415 396 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 TRIM60Q495X7 471 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 MCMDC2Q4G0Z9 681 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 GBP7Q8N8V2 638 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 ZNF622Q969S3 477 aaKnown RBP eCLIP4.77□□□□□ -1.65
RTTN-206ENST00000581161 DBNDD2Q9BQY9 259 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 PCDHA7Q9UN72 937 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 QSER1Q2KHR3 1735 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ERBB3P21860 1342 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 GOLGA8BA8MQT2 603 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ATP5J2-PTCD1G3V325 749 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ATP2A1O14983 1001 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 PTCD1O75127 700 aaKnown RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 ERCC3P19447 782 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 KCNA4P22459 653 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 EVCP57679 992 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 GNG11P61952 73 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ALDH8A1Q9H2A2 487 aaPredicted RBP4.77□□□□□ -1.65
RTTN-206ENST00000581161 PPME1Q9Y570 386 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 IRS2Q9Y4H2 1338 aa4.77□□□□□ -1.65
RTTN-206ENST00000581161 ZSCAN12O43309 604 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 SYF2O95926 243 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 SLC39A6Q13433 755 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 DPCR1Q3MIW9 517 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 SARM1Q6SZW1 724 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 AFAP1L1Q8TED9 768 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 RNF216Q9NWF9 866 aaPredicted RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 ATP2B1P20020 1258 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 FKBP4Q02790 459 aaKnown RBP eCLIP4.76□□□□□ -1.65
RTTN-206ENST00000581161 PSME1Q06323 249 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 IQCB1Q15051 598 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 TMEM259Q4ZIN3 620 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 SH2D4BQ5SQS7 431 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 USPL1Q5W0Q7 1092 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 MSL1Q68DK7 614 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 STXBP4Q6ZWJ1 553 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 UBE3BQ7Z3V4 1068 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 LRRN4CLQ8ND94 238 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 NSUN7Q8NE18 718 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 LINS1Q8NG48 757 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 CARD6Q9BX69 1037 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 NID2Q14112 1375 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 B4DLN1 442 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 PFKFB2O60825 505 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 ATP2C2O75185 946 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 CYP21A2P08686 494 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 MRPL12P52815 198 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 IRX5P78411 483 aaPredicted RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 FANCCQ00597 558 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 GRM1Q13255 1194 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 IMMTQ16891 758 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 TNNI3KQ59H18 835 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 DHX32Q7L7V1 743 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 IP6K1Q92551 441 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 CTAGE1Q96RT6 745 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 EIF2AQ9BY44 585 aaKnown RBP4.76□□□□□ -1.65
RTTN-206ENST00000581161 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 MYH3P11055 1940 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 NUP98P52948 1817 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 KDM4FA0A1W2PPD8 638 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 SPTLC2O15270 562 aa4.76□□□□□ -1.65
RTTN-206ENST00000581161 FBXW4P57775 412 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms