RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 GRK4P32298 578 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 HMGCS2P54868 508 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 BACE1P56817 501 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 TATDN1Q6P1N9 297 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
SENP3-204ENST00000580997 EHD4Q9H223 541 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
SENP3-204ENST00000580997 C19orf81C9J6K1 198 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
SENP3-204ENST00000580997 IFIT2P09913 472 aaKnown RBP15.16■□□□□ 0.02
SENP3-204ENST00000580997 PRKCZQ05513 592 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.02
SENP3-204ENST00000580997 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 C20orf194Q5TEA3 1177 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
SENP3-204ENST00000580997 RAET1EQ8TD07 263 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
SENP3-204ENST00000580997 SAP30BPQ9UHR5 308 aaKnown RBP15.16■□□□□ 0.02
SENP3-204ENST00000580997 KIAA0100Q14667 2235 aaKnown RBP15.16■□□□□ 0.02
SENP3-204ENST00000580997 CDK5RAP2Q96SN8 1893 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 APBB1O00213 710 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
SENP3-204ENST00000580997 USP5P45974 858 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 GCLCP48506 637 aaPredicted RBP15.15■□□□□ 0.02
SENP3-204ENST00000580997 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
SENP3-204ENST00000580997 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
SENP3-204ENST00000580997 LOC285556D6RIA3 1793 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
SENP3-204ENST00000580997 PDE6AP16499 860 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 FLT3LGP49771 235 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 IRF5Q13568 498 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 MTMR2Q13614 643 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 MTFR1Q15390 333 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
SENP3-204ENST00000580997 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 PXYLP1Q8TE99 480 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
SENP3-204ENST00000580997 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 GOLIM4O00461 696 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
SENP3-204ENST00000580997 GDF11O95390 407 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 SLC34A2O95436 690 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 MYCP01106 439 aaPredicted RBP15.13■□□□□ 0.01
SENP3-204ENST00000580997 ATP5JP18859 108 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 ATAD5Q96QE3 1844 aa15.13■□□□□ 0.01
SENP3-204ENST00000580997 POTEMA6NI47 508 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 ADCY3O60266 1144 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 PLCD1P51178 756 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 NKX2-3Q8TAU0 364 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 MORF4L1Q9UBU8 362 aa15.12■□□□□ 0.01
SENP3-204ENST00000580997 GH2P01242 217 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 GJB1P08034 283 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 CCL5P13501 91 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 GJA8P48165 433 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 UBXN2AP68543 259 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 GABPAQ06546 454 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
SENP3-204ENST00000580997 COA7Q96BR5 231 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 EDC3Q96F86 508 aaKnown RBP15.11■□□□□ 0.01
SENP3-204ENST00000580997 C12orf42Q96LP6 360 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
SENP3-204ENST00000580997 P2RX7Q99572 595 aaKnown RBP15.11■□□□□ 0.01
SENP3-204ENST00000580997 HAUS7Q99871 368 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 CRNKL1Q9BZJ0 848 aaKnown RBP15.11■□□□□ 0.01
SENP3-204ENST00000580997 LRRCC1Q9C099 1032 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 BOLA2Q9H3K6 86 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 PAG1Q9NWQ8 432 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SENP3-204ENST00000580997 MGAMO43451 1857 aa15.1■□□□□ 0.01
SENP3-204ENST00000580997 SHMT1P34896 483 aa15.1■□□□□ 0.01
SENP3-204ENST00000580997 ADD2P35612 726 aa15.1■□□□□ 0.01
SENP3-204ENST00000580997 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
SENP3-204ENST00000580997 GJD2Q9UKL4 321 aa15.1■□□□□ 0.01
SENP3-204ENST00000580997 HERVK_113P62684 666 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 IRX3P78415 501 aaPredicted RBP15.09■□□□□ 0.01
SENP3-204ENST00000580997 ABCB5Q2M3G0 1257 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 UBE2Q1Q7Z7E8 422 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 LCORLQ8N3X6 602 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 RNF208Q9H0X6 261 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 DCTPP1Q9H773 170 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
SENP3-204ENST00000580997 MCM9Q9NXL9 1143 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
SENP3-204ENST00000580997 BIN2Q9UBW5 565 aaPredicted RBP15.09■□□□□ 0.01
SENP3-204ENST00000580997 MYH1P12882 1939 aa15.08■□□□□ 0
SENP3-204ENST00000580997 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
SENP3-204ENST00000580997 ELNP15502 786 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms