RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 CNBD1Q8NA66 436 aa8.97□□□□□ -0.97
PSMD11-209ENST00000580904 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
PSMD11-209ENST00000580904 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
PSMD11-209ENST00000580904 BICC1Q9H694 974 aaKnown RBP8.97□□□□□ -0.97
PSMD11-209ENST00000580904 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
PSMD11-209ENST00000580904 PARP3Q9Y6F1 533 aa8.97□□□□□ -0.97
PSMD11-209ENST00000580904 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
PSMD11-209ENST00000580904 LAMB2P55268 1798 aa8.96□□□□□ -0.97
PSMD11-209ENST00000580904 EML1O00423 815 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 NPHP1O15259 732 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 PDE8AO60658 829 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
PSMD11-209ENST00000580904 HSP90B1P14625 803 aaKnown RBP8.96□□□□□ -0.98
PSMD11-209ENST00000580904 ITGA6P23229 1130 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 ATP2B4P23634 1241 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 MSX1P28360 303 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 FOXO4P98177 505 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.98
PSMD11-209ENST00000580904 SLC10A5Q5PT55 438 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 CEP85Q6P2H3 762 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 ANKRD44Q8N8A2 993 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 PLA2G12BQ9BX93 195 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 GJA3Q9Y6H8 435 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 USP3Q9Y6I4 520 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 DDX60Q8IY21 1712 aaKnown RBP8.96□□□□□ -0.98
PSMD11-209ENST00000580904 RIC1Q4ADV7 1423 aa8.96□□□□□ -0.98
PSMD11-209ENST00000580904 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
PSMD11-209ENST00000580904 C21orf2O43822 256 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 CTSWP56202 376 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 ST5P78524 1137 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 MTX1Q13505 466 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 LMBR1LQ6UX01 489 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 SIRT2Q8IXJ6 389 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 RPAP2Q8IXW5 612 aaPredicted RBP8.95□□□□□ -0.98
PSMD11-209ENST00000580904 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 PRIMPOLQ96LW4 560 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 ANKIB1Q9P2G1 1089 aa8.95□□□□□ -0.98
PSMD11-209ENST00000580904 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
PSMD11-209ENST00000580904 TMEM88BA6NKF7 163 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 CSF1RP07333 972 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 FIGNL1Q6PIW4 674 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 TTLL11Q8NHH1 800 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 ZDHHC1Q8WTX9 485 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 COL26A1Q96A83 441 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 BRIP1Q9BX63 1249 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 CRISPLD1Q9H336 500 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 GPAMQ9HCL2 828 aa8.94□□□□□ -0.98
PSMD11-209ENST00000580904 CXXC1Q9P0U4 656 aaPredicted RBP8.94□□□□□ -0.98
PSMD11-209ENST00000580904 PNMA6EA0A0J9YXQ4 647 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 H3BM21 787 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 SRGAP3O43295 1099 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 POLD1P28340 1107 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 ATP8B2P98198 1209 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 SF3B3Q15393 1217 aaKnown RBP8.93□□□□□ -0.98
PSMD11-209ENST00000580904 SV2AQ7L0J3 742 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 NLRP8Q86W28 1048 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 IRF7Q92985 503 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 HCN4Q9Y3Q4 1203 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 RTL9Q8NET4 1388 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 C10orf71Q711Q0 1435 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 MYH3P11055 1940 aa8.93□□□□□ -0.98
PSMD11-209ENST00000580904 ANKRD31Q8N7Z5 1873 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 KLRG2A4D1S0 409 aaPredicted RBP8.92□□□□□ -0.98
PSMD11-209ENST00000580904 LGR5O75473 907 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 HDAC1Q13547 482 aaPredicted RBP8.92□□□□□ -0.98
PSMD11-209ENST00000580904 OCLNQ16625 522 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 CRY2Q49AN0 593 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 CCDC152Q4G0S7 254 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 ALDH16A1Q8IZ83 802 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 NANOS1Q8WY41 292 aaKnown RBP8.92□□□□□ -0.98
PSMD11-209ENST00000580904 TRERF1Q96PN7 1200 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
PSMD11-209ENST00000580904 GREM2Q9H772 168 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 PPP4R2Q9NY27 417 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 PHF24Q9UPV7 400 aa8.92□□□□□ -0.98
PSMD11-209ENST00000580904 CDC14CA4D256 554 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 HMMRO75330 724 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 IGHDP01880 384 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 PDE6BP35913 854 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 RFX5P48382 616 aaPredicted RBP8.91□□□□□ -0.98
PSMD11-209ENST00000580904 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
PSMD11-209ENST00000580904 RTN1Q16799 776 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 CCDC57Q2TAC2 916 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 CCDC136Q96JN2 1154 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 RUBCNLQ9H714 662 aa8.91□□□□□ -0.98
PSMD11-209ENST00000580904 KIF13BQ9NQT8 1826 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 A0A1W2PNR3 127 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 ANKRD18BA2A2Z9 1011 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 SRGNP10124 158 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 ATP4AP20648 1035 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 HOXA10P31260 410 aaPredicted RBP8.9□□□□□ -0.98
PSMD11-209ENST00000580904 TXLNAP40222 546 aa8.9□□□□□ -0.98
PSMD11-209ENST00000580904 PTPN12Q05209 780 aaKnown RBP8.9□□□□□ -0.98
PSMD11-209ENST00000580904 RWDD1Q9H446 243 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms