RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	LRRFIP2	Q9Y608	721 aa	Known RBP	10.89	□□□□□ -0.67
NUP85-208	ENST00000578830	SIPA1L1	O43166	1804 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	GAK	O14976	1311 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	SOX1	O00570	391 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	CTNND1	O60716	968 aa	Known RBP	10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	CIAO1	O76071	339 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	C20orf194	Q5TEA3	1177 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	SH3BP5L	Q7L8J4	393 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	ZGPAT	Q8N5A5	531 aa	Known RBP	10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	COA7	Q96BR5	231 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	CEP126	Q9P2H0	1117 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	AGTPBP1	Q9UPW5	1226 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	VCAN	P13611	3396 aa		10.88	□□□□□ -0.67
NUP85-208	ENST00000578830	PRUNE2	Q8WUY3	3088 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	FAM110C	Q1W6H9	321 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	NECAB2	Q7Z6G3	386 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	SLF2	Q8IX21	1173 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	ANKLE1	Q8NAG6	615 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	LRCH3	Q96II8	777 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	PAWR	Q96IZ0	340 aa	Known RBP	10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	RYDEN	Q9NUL5	291 aa	Known RBP	10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	STAP2	Q9UGK3	403 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	PNMA3	Q9UL41	463 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	MYH1	P12882	1939 aa		10.87	□□□□□ -0.67
NUP85-208	ENST00000578830	DDTL	A6NHG4	134 aa	Predicted RBP	10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	TRIM75P	A6NK02	468 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	TRIM27	P14373	513 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	BMP8B	P34820	402 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	PHKA1	P46020	1223 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	VARS2	Q5ST30	1063 aa	Known RBP	10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	ZKSCAN2	Q63HK3	967 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	DZIP1	Q86YF9	867 aa	Known RBP	10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	ANKRD13C	Q8N6S4	541 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	SIL1	Q9H173	461 aa		10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	NOB1	Q9ULX3	412 aa	Known RBP	10.86	□□□□□ -0.67
NUP85-208	ENST00000578830	PDS5A	Q29RF7	1337 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	MAST2	Q6P0Q8	1798 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	TBC1D12	O60347	775 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	HMGCR	P04035	888 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	RLBP1	P12271	317 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	IL15	P40933	162 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	GCLC	P48506	637 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	TREML2	Q5T2D2	321 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	PANK1	Q8TE04	598 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	DIS3L	Q8TF46	1054 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	CLUAP1	Q96AJ1	413 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	GDF15	Q99988	308 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	KRTAP3-3	Q9BYR6	98 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	KRTAP3-2	Q9BYR7	98 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	TBC1D2	Q9BYX2	928 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	DDX4	Q9NQI0	724 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	GTF3C3	Q9Y5Q9	886 aa		10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	COL2A1	P02458	1487 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-208	ENST00000578830	SLURP2	P0DP57	97 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	BTD	P43251	543 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	PICALM	Q13492	652 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	CCDC102B	Q68D86	513 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	ATF7IP	Q6VMQ6	1270 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	CRBN	Q96SW2	442 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	GPHN	Q9NQX3	736 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	ABCF2	Q9UG63	623 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	MROH7-TTC4	A0A0A0MT08	1334 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	RPTOR	Q8N122	1335 aa		10.84	□□□□□ -0.67
NUP85-208	ENST00000578830	GPR75-ASB3	A0A0A6YYF3	556 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	MAP4K4	O95819	1239 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	UBTFL1	P0CB47	393 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	ADORA1	P30542	326 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	RASGRF1	Q13972	1273 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	DSG2	Q14126	1118 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	CCDC84	Q86UT8	332 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	FTSJ3	Q8IY81	847 aa	Known RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	C7orf61	Q8IZ16	206 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	ZNF280C	Q8ND82	737 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	NBPF3	Q9H094	633 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	HMX1	Q9NP08	348 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	GJD2	Q9UKL4	321 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	CDH23	Q9H251	3354 aa		10.83	□□□□□ -0.68
NUP85-208	ENST00000578830	IPO8	O15397	1037 aa	Known RBP	10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	NUDT7	P0C024	238 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	RHBDL3	P58872	404 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	MECOM	Q03112	1051 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	SPP2	Q13103	211 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	LRIT3	Q3SXY7	679 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	PLPP6	Q8IY26	295 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	EXOC6	Q8TAG9	804 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	COPRS	Q9NQ92	184 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	HDAC5	Q9UQL6	1122 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	PCDHGA4	Q9Y5G9	962 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	RLF	Q13129	1914 aa		10.82	□□□□□ -0.68
NUP85-208	ENST00000578830	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.81	□□□□□ -0.68
NUP85-208	ENST00000578830	USP17L5	A8MUK1	530 aa		10.81	□□□□□ -0.68

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