RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
SS18-210ENST00000578700 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
SS18-210ENST00000578700 ALPK3Q96L96 1907 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 DDTLA6NHG4 134 aaPredicted RBP12.19□□□□□ -0.46
SS18-210ENST00000578700 MCCP23508 829 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 C1QBPQ07021 282 aaKnown RBP12.19□□□□□ -0.46
SS18-210ENST00000578700 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 NECAB2Q7Z6G3 386 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 PXYLP1Q8TE99 480 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 DIAPH3Q9NSV4 1193 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
SS18-210ENST00000578700 SYN1P17600 705 aa12.18□□□□□ -0.46
SS18-210ENST00000578700 PHKA1P46020 1223 aa12.18□□□□□ -0.46
SS18-210ENST00000578700 RBM25P49756 843 aaKnown RBP12.18□□□□□ -0.46
SS18-210ENST00000578700 KIAA1211Q6ZU35 1233 aa12.18□□□□□ -0.46
SS18-210ENST00000578700 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
SS18-210ENST00000578700 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SS18-210ENST00000578700 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
SS18-210ENST00000578700 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
SS18-210ENST00000578700 ENTPD3O75355 529 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 CAPN2P17655 700 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 ATP5JP18859 108 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 CHMLP26374 656 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 IRF5Q13568 498 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 Q7L0L9 218 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
SS18-210ENST00000578700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
SS18-210ENST00000578700 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
SS18-210ENST00000578700 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
SS18-210ENST00000578700 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
SS18-210ENST00000578700 EPB41L2O43491 1005 aaKnown RBP12.16□□□□□ -0.46
SS18-210ENST00000578700 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
SS18-210ENST00000578700 ADORA1P30542 326 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 BTDP43251 543 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 TRIM32Q13049 653 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 SPP2Q13103 211 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
SS18-210ENST00000578700 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 ESYT1Q9BSJ8 1104 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
SS18-210ENST00000578700 TIMM10P62072 90 aa12.15□□□□□ -0.46
SS18-210ENST00000578700 CCDC102BQ68D86 513 aa12.15□□□□□ -0.46
SS18-210ENST00000578700 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
SS18-210ENST00000578700 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
SS18-210ENST00000578700 FSD1Q9BTV5 496 aa12.15□□□□□ -0.46
SS18-210ENST00000578700 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
SS18-210ENST00000578700 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
SS18-210ENST00000578700 DBNLQ9UJU6 430 aaKnown RBP12.15□□□□□ -0.46
SS18-210ENST00000578700 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 CYP2B6P20813 491 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 GDF15Q99988 308 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 BOLA2Q9H3K6 86 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 ANO2Q9NQ90 1003 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
SS18-210ENST00000578700 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
SS18-210ENST00000578700 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 SEMA3EO15041 775 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 HMGCRP04035 888 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 BMP8BP34820 402 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
SS18-210ENST00000578700 HMGCS2P54868 508 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
SS18-210ENST00000578700 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
SS18-210ENST00000578700 GAKO14976 1311 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 ATAD5Q96QE3 1844 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 PEX10O60683 326 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 GCLCP48506 637 aaPredicted RBP12.12□□□□□ -0.47
SS18-210ENST00000578700 MECOMQ03112 1051 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 PABPC4Q13310 644 aaKnown RBP eCLIP12.12□□□□□ -0.47
SS18-210ENST00000578700 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 RABEP1Q15276 862 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
SS18-210ENST00000578700 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
SS18-210ENST00000578700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
SS18-210ENST00000578700 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
SS18-210ENST00000578700 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms