RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 OXER1Q8TDS5 423 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 SERTAD1Q9UHV2 236 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 SERPINB2P05120 415 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 TPM1P09493 284 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 IL17RAQ96F46 866 aa18.96■□□□□ 0.63
DDX42-208ENST00000578681 GPATCH11Q8N954 259 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 POLR3EQ9NVU0 708 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 PCDHB6Q9Y5E3 794 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 KIF20AO95235 890 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 LIFRP42702 1097 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 ARID5BQ14865 1188 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 NFIXQ14938 502 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 RASGRP4Q8TDF6 673 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
DDX42-208ENST00000578681 IFNAR1P17181 557 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 SCNN1DP51172 638 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 DACH1Q9UI36 760 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CMA1P23946 247 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CDK5RAP3Q96JB5 506 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM1P0DP23 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM2P0DP24 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 CALM3P0DP25 149 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 NAPAP54920 295 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 RBM17Q96I25 401 aaKnown RBP18.94■□□□□ 0.62
DDX42-208ENST00000578681 ZHX3Q9H4I2 956 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 AFF2P51816 1311 aa18.94■□□□□ 0.62
DDX42-208ENST00000578681 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 COBLO75128 1261 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 UBA7P41226 1012 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 MRC1P22897 1456 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CUTAO60888 179 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CDC25AP30304 524 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 XPO4Q9C0E2 1151 aaKnown RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 CBFA2T2O43439 604 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 WDHD1O75717 1129 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 GTPBP4Q9BZE4 634 aaKnown RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX42-208ENST00000578681 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
DDX42-208ENST00000578681 FILIP1LQ4L180 1135 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 PCDHA5Q9Y5H7 936 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
DDX42-208ENST00000578681 PNMA1Q8ND90 353 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
DDX42-208ENST00000578681 TCP10Q12799 353 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 RIC1Q4ADV7 1423 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 BTDP43251 543 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
DDX42-208ENST00000578681 PPFIBP1Q86W92 1011 aa18.92■□□□□ 0.62
DDX42-208ENST00000578681 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 BARGINQ6ZT62 677 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 NKX2-3Q8TAU0 364 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 GPCPD1Q9NPB8 672 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 FOXP2O15409 715 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 MMP1P03956 469 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 DMTNQ08495 405 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 CTR9Q6PD62 1173 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 RBM28Q9NW13 759 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 AP5Z1O43299 807 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 VPS72Q15906 364 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SH3RF3Q8TEJ3 882 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
DDX42-208ENST00000578681 APBA3O96018 575 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 NLRP12P59046 1061 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 SLF2Q8IX21 1173 aa18.91■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQ27 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQ64 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 A0A1W2PQD8 194 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 TCRBV5S4A2TA0A5A2 114 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 NBPF3Q9H094 633 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 CASP1P29466 404 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 FANCCQ00597 558 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 MYL5Q02045 173 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 ALX1Q15699 326 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 FMR1NBQ8N0W7 255 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 DYNC1I1O14576 645 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
DDX42-208ENST00000578681 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 TRPM3Q9HCF6 1732 aaPredicted RBP18.9■□□□□ 0.62
DDX42-208ENST00000578681 TDRD7Q8NHU6 1098 aaKnown RBP18.89■□□□□ 0.62
DDX42-208ENST00000578681 CACTINQ8WUQ7 758 aaKnown RBP18.89■□□□□ 0.62
DDX42-208ENST00000578681 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms