RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-206ENST00000578018 GINM1Q9NU53 330 aa20.27■□□□□ 0.84
CDK5RAP3-206ENST00000578018 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-206ENST00000578018 ZBTB21Q9ULJ3 1066 aa20.27■□□□□ 0.84
CDK5RAP3-206ENST00000578018 DDX19BQ9UMR2 479 aa20.27■□□□□ 0.84
CDK5RAP3-206ENST00000578018 GJB1P08034 283 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 ELNP15502 786 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 GJA8P48165 433 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 BACE1P56817 501 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 SIRT2Q8IXJ6 389 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 NKX2-3Q8TAU0 364 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 RNF208Q9H0X6 261 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 ZBTB40Q9NUA8 1239 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
CDK5RAP3-206ENST00000578018 USP5P45974 858 aa20.25■□□□□ 0.83
CDK5RAP3-206ENST00000578018 PXYLP1Q8TE99 480 aa20.25■□□□□ 0.83
CDK5RAP3-206ENST00000578018 COA7Q96BR5 231 aa20.25■□□□□ 0.83
CDK5RAP3-206ENST00000578018 KIF1BPQ96EK5 621 aa20.25■□□□□ 0.83
CDK5RAP3-206ENST00000578018 UNC93B1Q9H1C4 597 aa20.25■□□□□ 0.83
CDK5RAP3-206ENST00000578018 HMMRO75330 724 aa20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 INHAP05111 366 aa20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 CLASRPQ8N2M8 674 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 RIOK1Q9BRS2 568 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 EHD4Q9H223 541 aa20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 TMOD4Q9NZQ9 345 aa20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 PLXNB2O15031 1838 aa20.24■□□□□ 0.83
CDK5RAP3-206ENST00000578018 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 C19orf81C9J6K1 198 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 APBB1O00213 710 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 IRX3P78415 501 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 TTF1Q15361 905 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 TATDN1Q6P1N9 297 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 UBE2Q1Q7Z7E8 422 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 MORF4L1Q9UBU8 362 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 SERPINB13Q9UIV8 391 aa20.23■□□□□ 0.83
CDK5RAP3-206ENST00000578018 USP17L10C9JJH3 530 aa20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 GH2P01242 217 aa20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 PDE6AP16499 860 aa20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 U2AF1L4Q8WU68 220 aaKnown RBP20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
CDK5RAP3-206ENST00000578018 HABP4Q5JVS0 413 aaKnown RBP20.21■□□□□ 0.83
CDK5RAP3-206ENST00000578018 TAOK2Q9UL54 1235 aa20.21■□□□□ 0.83
CDK5RAP3-206ENST00000578018 MAGEB6P1A0A0J9YX57 407 aa20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 IFIT2P09913 472 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 HERVK_113P62684 666 aa20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 SLC9C2Q5TAH2 1124 aa20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 TTC6Q86TZ1 520 aa20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 EMILIN3Q9NT22 766 aa20.2■□□□□ 0.82
CDK5RAP3-206ENST00000578018 MYH7P12883 1935 aa20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 GOLIM4O00461 696 aa20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 DNAJC2Q99543 621 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 TXNRD2Q9NNW7 524 aa20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 PAK6Q9NQU5 681 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
CDK5RAP3-206ENST00000578018 TCRBV5S4A2TA0A5A2 114 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 PEX10O60683 326 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 SGPL1O95470 568 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 SHMT1P34896 483 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 PLCD1P51178 756 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 USP17L2Q6R6M4 530 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 C12orf42Q96LP6 360 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 ZNF532Q9HCE3 1301 aa20.18■□□□□ 0.82
CDK5RAP3-206ENST00000578018 H0YGN5 161 aa20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 FARP2O94887 1054 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 HMGCRP04035 888 aa20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 CERKLQ49MI3 558 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 DEFB118Q96PH6 123 aa20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 FEZ1Q99689 392 aa20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 CRNKL1Q9BZJ0 848 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 MYH8P13535 1937 aa20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 RANBP2P49792 3224 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP3-206ENST00000578018 GABPAQ06546 454 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 RAB3GAP1Q15042 981 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 ABCB5Q2M3G0 1257 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 LCORLQ8N3X6 602 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 GPRC5AQ8NFJ5 357 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 GTF3C2Q8WUA4 911 aaPredicted RBP20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 RBPJLQ9UBG7 517 aa20.16■□□□□ 0.82
CDK5RAP3-206ENST00000578018 BAZ2AQ9UIF9 1905 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 EVX2Q03828 476 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 SDR42E1Q8WUS8 393 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 HTATIP2Q9BUP3 242 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 KIAA1683Q9H0B3 1180 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 PAG1Q9NWQ8 432 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 MCM9Q9NXL9 1143 aa20.15■□□□□ 0.82
CDK5RAP3-206ENST00000578018 COLQQ9Y215 455 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms