RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	RNF41	Q9H4P4	317 aa	Predicted RBP	11.78	□□□□□ -0.52
SPOP-222	ENST00000577134	ZNF287	Q9HBT7	754 aa		11.78	□□□□□ -0.52
SPOP-222	ENST00000577134	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.78	□□□□□ -0.52
SPOP-222	ENST00000577134	TAOK2	Q9UL54	1235 aa		11.78	□□□□□ -0.52
SPOP-222	ENST00000577134	ATAD5	Q96QE3	1844 aa		11.78	□□□□□ -0.52
SPOP-222	ENST00000577134	PAPPA2	Q9BXP8	1791 aa		11.77	□□□□□ -0.52
SPOP-222	ENST00000577134		B4E1Z4	1266 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	UBE2Q2L	H0YL09	131 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	MPHOSPH10	O00566	681 aa	Known RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	ORC4	O43929	436 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	RANBP6	O60518	1105 aa	Known RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	CTNND1	O60716	968 aa	Known RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	MAP3K9	P80192	1104 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	TFAP4	Q01664	338 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	MAP3K11	Q16584	847 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	ABCB5	Q2M3G0	1257 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	C2orf69	Q8N8R5	385 aa		11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	UPF2	Q9HAU5	1272 aa	Known RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.77	□□□□□ -0.53
SPOP-222	ENST00000577134	KDM4A	O75164	1064 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	PC	P11498	1178 aa	Known RBP	11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	CAP2	P40123	477 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	FKBP1B	P68106	108 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	TRDN	Q13061	729 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	COL9A3	Q14050	684 aa	Predicted RBP	11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	NCOA7	Q8NI08	942 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	ESR2	Q92731	530 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	CCDC17	Q96LX7	622 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	JAKMIP1	Q96N16	626 aa	Known RBP	11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	NEK1	Q96PY6	1258 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	KRT23	Q9C075	422 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	CNNM2	Q9H8M5	875 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	DOCK1	Q14185	1865 aa		11.76	□□□□□ -0.53
SPOP-222	ENST00000577134	TSPY2	A6NKD2	308 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	GH2	P01242	217 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	TSPY3	P0CV98	308 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	TSPY8	P0CW00	308 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CPA1	P15085	419 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	GUCY1A2	P33402	732 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	RBM25	P49756	843 aa	Known RBP	11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	VGLL4	Q14135	290 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	KRT32	Q14532	448 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	SEPT2	Q15019	361 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	LDLRAD1	Q5T700	205 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CYB5R4	Q7L1T6	521 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CHST3	Q7LGC8	479 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	RALYL	Q86SE5	291 aa	Known RBP	11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CCDC84	Q86UT8	332 aa	Predicted RBP	11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	ANKRD13A	Q8IZ07	590 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	SCYL3	Q8IZE3	742 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CLMN	Q96JQ2	1002 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	ZKSCAN3	Q9BRR0	538 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	ELP3	Q9H9T3	547 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	CABP5	Q9NP86	173 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	ZSWIM5	Q9P217	1185 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	SNCAIP	Q9Y6H5	919 aa		11.75	□□□□□ -0.53
SPOP-222	ENST00000577134	GREB1L	Q9C091	1923 aa	Predicted RBP	11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	TMEM88B	A6NKF7	163 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	NMT2	O60551	498 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	ANAPC15	P60006	121 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	RAB3GAP1	Q15042	981 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	NOL9	Q5SY16	702 aa	Known RBP	11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	NEDD1	Q8NHV4	660 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	TBC1D32	Q96NH3	1257 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	IL17RB	Q9NRM6	502 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	ZBTB21	Q9ULJ3	1066 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	CSAD	Q9Y600	493 aa		11.74	□□□□□ -0.53
SPOP-222	ENST00000577134	IGKV6D-41	A0A0C4DH26	115 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	ASNS	P08243	561 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	PTPRA	P18433	802 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	CAST	P20810	708 aa	Known RBP	11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	PSMA5	P28066	241 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	APLP1	P51693	650 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	HUNK	P57058	714 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	ANTXR2	P58335	489 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	EXOSC10	Q01780	885 aa	Known RBP	11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	TMEM179	Q6ZVK1	233 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	SAPCD2	Q86UD0	394 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	CLEC10A	Q8IUN9	316 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	PHIP	Q8WWQ0	1821 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	CNKSR2	Q8WXI2	1034 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	SLC10A4	Q96EP9	437 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	IL17RA	Q96F46	866 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	TCEANC2	Q96MN5	208 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	KIF2C	Q99661	725 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	PICK1	Q9NRD5	415 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	ABT1	Q9ULW3	272 aa	Known RBP	11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	TLL2	Q9Y6L7	1015 aa		11.73	□□□□□ -0.53
SPOP-222	ENST00000577134	PLIN4	Q96Q06	1357 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	UNCX	A6NJT0	531 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	USP17L5	A8MUK1	530 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	PRC1	O43663	620 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	MCM5	P33992	734 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	BLOC1S2	Q6QNY1	142 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	DHX32	Q7L7V1	743 aa	Known RBP	11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	CEP95	Q96GE4	821 aa		11.72	□□□□□ -0.53
SPOP-222	ENST00000577134	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.72	□□□□□ -0.53

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