RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 USP5P45974 858 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 PLCD1P51178 756 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 PRMT2P55345 433 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 RRP1P56182 461 aaKnown RBP21.14■□□□□ 0.97
SMG6-214ENST00000573827 GABPAQ06546 454 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 KIF22Q14807 665 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 LCORLQ8N3X6 602 aa21.14■□□□□ 0.97
SMG6-214ENST00000573827 SHMT1P34896 483 aa21.13■□□□□ 0.97
SMG6-214ENST00000573827 BACE1P56817 501 aa21.13■□□□□ 0.97
SMG6-214ENST00000573827 CRACR2BQ8N4Y2 399 aaPredicted RBP21.13■□□□□ 0.97
SMG6-214ENST00000573827 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
SMG6-214ENST00000573827 DOCK3Q8IZD9 2030 aa21.12■□□□□ 0.97
SMG6-214ENST00000573827 ECM2O94769 699 aaPredicted RBP21.12■□□□□ 0.97
SMG6-214ENST00000573827 MTMR2Q13614 643 aa21.12■□□□□ 0.97
SMG6-214ENST00000573827 BCL11AQ9H165 835 aa21.12■□□□□ 0.97
SMG6-214ENST00000573827 MGAMO43451 1857 aa21.11■□□□□ 0.97
SMG6-214ENST00000573827 NAV1Q8NEY1 1877 aa21.11■□□□□ 0.97
SMG6-214ENST00000573827 SLC9C1Q4G0N8 1177 aa21.11■□□□□ 0.97
SMG6-214ENST00000573827 SH3TC2Q8TF17 1288 aa21.11■□□□□ 0.97
SMG6-214ENST00000573827 ASCC2Q9H1I8 757 aaPredicted RBP21.11■□□□□ 0.97
SMG6-214ENST00000573827 AS3MTQ9HBK9 375 aa21.11■□□□□ 0.97
SMG6-214ENST00000573827 DCP1AQ9NPI6 582 aaPredicted RBP21.11■□□□□ 0.97
SMG6-214ENST00000573827 PRKAB2O43741 272 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 GH2P01242 217 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
SMG6-214ENST00000573827 GUCY1A2P33402 732 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 PRKCZQ05513 592 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 POTEEQ6S8J3 1075 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 TTC6Q86TZ1 520 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 SDR42E1Q8WUS8 393 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 CRNKL1Q9BZJ0 848 aaKnown RBP21.1■□□□□ 0.97
SMG6-214ENST00000573827 ARMT1Q9H993 441 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 ECHDC1Q9NTX5 307 aa21.1■□□□□ 0.97
SMG6-214ENST00000573827 FMNL1O95466 1100 aaPredicted RBP21.09■□□□□ 0.97
SMG6-214ENST00000573827 FAM110CQ1W6H9 321 aa21.09■□□□□ 0.97
SMG6-214ENST00000573827 SMCR8Q8TEV9 937 aaPredicted RBP21.09■□□□□ 0.97
SMG6-214ENST00000573827 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
SMG6-214ENST00000573827 PNMA3Q9UL41 463 aa21.09■□□□□ 0.97
SMG6-214ENST00000573827 GABRQQ9UN88 632 aa21.09■□□□□ 0.97
SMG6-214ENST00000573827 MYPNQ86TC9 1320 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 MYH7P12883 1935 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 C19orf81C9J6K1 198 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 USP17L10C9JJH3 530 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 SMIM22K7EJ46 135 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 MBD4O95243 580 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 CYP2D6P10635 497 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 FCGRTP55899 365 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 TSHZ3Q63HK5 1081 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 ANKRD13CQ8N6S4 541 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 TRIM34Q9BYJ4 488 aa21.08■□□□□ 0.97
SMG6-214ENST00000573827 EN2P19622 333 aaPredicted RBP21.07■□□□□ 0.96
SMG6-214ENST00000573827 C12orf42Q96LP6 360 aa21.07■□□□□ 0.96
SMG6-214ENST00000573827 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
SMG6-214ENST00000573827 HOXD10P28358 340 aa21.06■□□□□ 0.96
SMG6-214ENST00000573827 GCLCP48506 637 aaPredicted RBP21.06■□□□□ 0.96
SMG6-214ENST00000573827 CERKLQ49MI3 558 aaPredicted RBP21.06■□□□□ 0.96
SMG6-214ENST00000573827 NBPF11Q86T75 865 aa21.06■□□□□ 0.96
SMG6-214ENST00000573827 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
SMG6-214ENST00000573827 OTUD7AQ8TE49 926 aaPredicted RBP21.06■□□□□ 0.96
SMG6-214ENST00000573827 CRBNQ96SW2 442 aa21.06■□□□□ 0.96
SMG6-214ENST00000573827 P2RX7Q99572 595 aaKnown RBP21.06■□□□□ 0.96
SMG6-214ENST00000573827 PUS7LQ9H0K6 701 aaKnown RBP21.06■□□□□ 0.96
SMG6-214ENST00000573827 MORF4L1Q9UBU8 362 aa21.06■□□□□ 0.96
SMG6-214ENST00000573827 GRK4P32298 578 aa21.05■□□□□ 0.96
SMG6-214ENST00000573827 PABPC4Q13310 644 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMG6-214ENST00000573827 MTFR1Q15390 333 aa21.05■□□□□ 0.96
SMG6-214ENST00000573827 ABCB5Q2M3G0 1257 aa21.05■□□□□ 0.96
SMG6-214ENST00000573827 SLC44A5Q8NCS7 719 aa21.05■□□□□ 0.96
SMG6-214ENST00000573827 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMG6-214ENST00000573827 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 BAZ2AQ9UIF9 1905 aaKnown RBP21.04■□□□□ 0.96
SMG6-214ENST00000573827 PEX10O60683 326 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 POLR3DP05423 398 aaPredicted RBP21.04■□□□□ 0.96
SMG6-214ENST00000573827 FLT3LGP49771 235 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 KIAA1683Q9H0B3 1180 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 TXNRD2Q9NNW7 524 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 ATP8A2Q9NTI2 1148 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 TMOD4Q9NZQ9 345 aa21.04■□□□□ 0.96
SMG6-214ENST00000573827 RANBP2P49792 3224 aaKnown RBP21.03■□□□□ 0.96
SMG6-214ENST00000573827 HERVK_113P62684 666 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 IRF5Q13568 498 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 USP17L2Q6R6M4 530 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 PI4K2BQ8TCG2 481 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 RAET1EQ8TD07 263 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 DYNLL2Q96FJ2 89 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 RBPJLQ9UBG7 517 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 GJD2Q9UKL4 321 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 TAOK2Q9UL54 1235 aa21.03■□□□□ 0.96
SMG6-214ENST00000573827 CYP2D7A0A087X1C5 515 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 TNPO2O14787 897 aaKnown RBP21.02■□□□□ 0.96
SMG6-214ENST00000573827 MYCP01106 439 aaPredicted RBP21.02■□□□□ 0.96
SMG6-214ENST00000573827 SEPT2Q15019 361 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 C12orf60Q5U649 245 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 SIAH1Q8IUQ4 282 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 SHISA4Q96DD7 197 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 STRBPQ96SI9 672 aaKnown RBP21.02■□□□□ 0.96
SMG6-214ENST00000573827 TMEM106CQ9BVX2 250 aa21.02■□□□□ 0.96
SMG6-214ENST00000573827 A0A1W2PRG0 241 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms