RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 PRDX5P30044 214 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 TOB1P50616 345 aaPredicted RBP18.77■□□□□ 0.6
POLR2A-201ENST00000572844 AKAP17AQ02040 695 aaKnown RBP18.77■□□□□ 0.6
POLR2A-201ENST00000572844 TROAPQ12815 778 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 FAM196AQ6ZSG2 479 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 CCDC186Q7Z3E2 898 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 DRC7Q8IY82 874 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
POLR2A-201ENST00000572844 AATFQ9NY61 560 aaKnown RBP eCLIP18.77■□□□□ 0.6
POLR2A-201ENST00000572844 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.6
POLR2A-201ENST00000572844 XDHP47989 1333 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 CYP2D7A0A087X1C5 515 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.59
POLR2A-201ENST00000572844 TXNRD3Q86VQ6 643 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 CNBD1Q8NA66 436 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 ZNF579Q8NAF0 562 aaKnown RBP18.77■□□□□ 0.59
POLR2A-201ENST00000572844 KCNJ14Q9UNX9 436 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 CEP131Q9UPN4 1083 aa18.77■□□□□ 0.59
POLR2A-201ENST00000572844 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
POLR2A-201ENST00000572844 NPHP1O15259 732 aa18.76■□□□□ 0.59
POLR2A-201ENST00000572844 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
POLR2A-201ENST00000572844 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
POLR2A-201ENST00000572844 PTPREP23469 700 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 GSTO1P78417 241 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 PDE4BQ07343 736 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 PKN1Q16512 942 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 DZIP1Q86YF9 867 aaKnown RBP18.75■□□□□ 0.59
POLR2A-201ENST00000572844 AOPEPQ8N6M6 819 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 PYCARDQ9ULZ3 195 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 NAV1Q8NEY1 1877 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 SMTNL1A8MU46 457 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 NEMFO60524 1076 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 ERCC4Q92889 916 aaPredicted RBP18.75■□□□□ 0.59
POLR2A-201ENST00000572844 PHF20Q9BVI0 1012 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 KCNH3Q9ULD8 1083 aa18.75■□□□□ 0.59
POLR2A-201ENST00000572844 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
POLR2A-201ENST00000572844 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
POLR2A-201ENST00000572844 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
POLR2A-201ENST00000572844 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
POLR2A-201ENST00000572844 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
POLR2A-201ENST00000572844 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
POLR2A-201ENST00000572844 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
POLR2A-201ENST00000572844 CDK5RAP2Q96SN8 1893 aa18.74■□□□□ 0.59
POLR2A-201ENST00000572844 IKBKBO14920 756 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 PPP4CP60510 307 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 KRBA2Q6ZNG9 492 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 ZNF804AQ7Z570 1209 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 CMTR1Q8N1G2 835 aaKnown RBP18.73■□□□□ 0.59
POLR2A-201ENST00000572844 PRIMPOLQ96LW4 560 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 TRPC5Q9UL62 973 aaPredicted RBP18.73■□□□□ 0.59
POLR2A-201ENST00000572844 ROBO3Q96MS0 1386 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 PRDM1O75626 825 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 LDHBP07195 334 aaKnown RBP18.73■□□□□ 0.59
POLR2A-201ENST00000572844 TPM4P67936 248 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 PRR5LQ6MZQ0 368 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 FAM13BQ9NYF5 915 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 NRBP1Q9UHY1 535 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
POLR2A-201ENST00000572844 AFF2P51816 1311 aa18.73■□□□□ 0.59
POLR2A-201ENST00000572844 A0A087WWV3 80 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 KRT2P35908 639 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 SEPT12Q8IYM1 358 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 ANKS1AQ92625 1134 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 HOOK1Q9UJC3 728 aaKnown RBP18.72■□□□□ 0.59
POLR2A-201ENST00000572844 BMP15O95972 392 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 LDHCP07864 332 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 NR5A1Q13285 461 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 CCDC178Q5BJE1 867 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 SLC27A3Q5K4L6 730 aa18.72■□□□□ 0.59
POLR2A-201ENST00000572844 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
POLR2A-201ENST00000572844 CNTNAP5Q8WYK1 1306 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.71■□□□□ 0.59
POLR2A-201ENST00000572844 MYO1BO43795 1136 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 PLEKHA8P1O95397 391 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 BAG3O95817 575 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 DNTTIP2Q5QJE6 756 aaKnown RBP18.71■□□□□ 0.59
POLR2A-201ENST00000572844 C12orf60Q5U649 245 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 OXER1Q8TDS5 423 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 SHISA4Q96DD7 197 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
POLR2A-201ENST00000572844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.7■□□□□ 0.58
POLR2A-201ENST00000572844 ATP2B4P23634 1241 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 DHX8Q14562 1220 aaKnown RBP18.7■□□□□ 0.58
POLR2A-201ENST00000572844 NCAPHQ15003 741 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 CCDC144BQ3MJ40 725 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 LONRF3Q496Y0 759 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
POLR2A-201ENST00000572844 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 C17orf53Q8N3J3 647 aaPredicted RBP18.7■□□□□ 0.58
POLR2A-201ENST00000572844 CNNM3Q8NE01 707 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
POLR2A-201ENST00000572844 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 MCM9Q9NXL9 1143 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 PCDHB6Q9Y5E3 794 aa18.7■□□□□ 0.58
POLR2A-201ENST00000572844 V9GY48 417 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms