RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SERPINB13Q9UIV8 391 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ERC2O15083 957 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 TLR2O60603 784 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 NUCB1Q02818 461 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 APPBP2Q92624 585 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 EHD4Q9H223 541 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ZBTB21Q9ULJ3 1066 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 SLC4A4Q9Y6R1 1079 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
GTF3C1-213ENST00000571886 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 USP17L21D6R901 530 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 GH2P01242 217 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 CYP2C8P10632 490 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 CTGFP29279 349 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 SP3Q02447 781 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 CTR9Q6PD62 1173 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 TRIM34Q9BYJ4 488 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 CPA4Q9UI42 421 aa12.33□□□□□ -0.44
GTF3C1-213ENST00000571886 ASNSP08243 561 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 HMGCS2P54868 508 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 OTOP1Q7RTM1 612 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
GTF3C1-213ENST00000571886 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 GPAA1O43292 621 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 PDE4AP27815 886 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 MTMR2Q13614 643 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 SH3D19Q5HYK7 790 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 EPB41L4AQ9HCS5 686 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 MYH8P13535 1937 aa12.31□□□□□ -0.44
GTF3C1-213ENST00000571886 FOXP2O15409 715 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 ZFYP08048 801 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 AKR1B1P15121 316 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 BACE1P56817 501 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 SEPT2Q15019 361 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 ABCB5Q2M3G0 1257 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 TBC1D2Q9BYX2 928 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 HPS5Q9UPZ3 1129 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 DOCK3Q8IZD9 2030 aa12.3□□□□□ -0.44
GTF3C1-213ENST00000571886 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 PEX10O60683 326 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 BCRP11274 1271 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 CDK8P49336 464 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 EFCC1Q9HA90 598 aa12.29□□□□□ -0.44
GTF3C1-213ENST00000571886 MGAMO43451 1857 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 MINDY4BA8MYZ0 360 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 SBK1Q52WX2 424 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 C16orf86Q6ZW13 317 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 IFNL3Q8IZI9 196 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 RILPL2Q969X0 211 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 CABP5Q9NP86 173 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 PTPN22Q9Y2R2 807 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
GTF3C1-213ENST00000571886 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.45
GTF3C1-213ENST00000571886 C19orf81C9J6K1 198 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms