RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 NKX2-3Q8TAU0 364 aa21.29■■□□□ 1
SPNS2-202ENST00000570641 BRF1Q92994 677 aa21.29■■□□□ 1
SPNS2-202ENST00000570641 TMEM39BQ9GZU3 492 aa21.29■■□□□ 1
SPNS2-202ENST00000570641 GGA3Q9NZ52 723 aa21.29■■□□□ 1
SPNS2-202ENST00000570641 ANGEL1Q9UNK9 670 aaKnown RBP21.29■■□□□ 1
SPNS2-202ENST00000570641 SH2B2O14492 632 aaPredicted RBP21.28■■□□□ 1
SPNS2-202ENST00000570641 TSPY3P0CV98 308 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 TSPY8P0CW00 308 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 TFAP4Q01664 338 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 FAM47AQ5JRC9 791 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 SH2B1Q9NRF2 756 aaPredicted RBP21.28■■□□□ 1
SPNS2-202ENST00000570641 PPP2R3BQ9Y5P8 575 aa21.28■■□□□ 1
SPNS2-202ENST00000570641 SHMT1P34896 483 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 LIFRP42702 1097 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 WTAPQ15007 396 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 TMTC2Q8N394 836 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 IGDCC4Q8TDY8 1250 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 HOOK2Q96ED9 719 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 TMX3Q96JJ7 454 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 CCDC17Q96LX7 622 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 ZSCAN10Q96SZ4 725 aaPredicted RBP21.27■■□□□ 1
SPNS2-202ENST00000570641 DEFB129Q9H1M3 183 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
SPNS2-202ENST00000570641 TBC1D12O60347 775 aa21.26■□□□□ 0.99
SPNS2-202ENST00000570641 NEDD1Q8NHV4 660 aa21.26■□□□□ 0.99
SPNS2-202ENST00000570641 ZC3H15Q8WU90 426 aaKnown RBP21.26■□□□□ 0.99
SPNS2-202ENST00000570641 DCPSQ96C86 337 aaKnown RBP21.26■□□□□ 0.99
SPNS2-202ENST00000570641 ZKSCAN3Q9BRR0 538 aa21.26■□□□□ 0.99
SPNS2-202ENST00000570641 TAF1DQ9H5J8 278 aaPredicted RBP21.26■□□□□ 0.99
SPNS2-202ENST00000570641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
SPNS2-202ENST00000570641 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
SPNS2-202ENST00000570641 TNKSO95271 1327 aa21.26■□□□□ 0.99
SPNS2-202ENST00000570641 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 EVCP57679 992 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 APOBRQ0VD83 1088 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 TATDN1Q6P1N9 297 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 PNMA8AQ86V59 439 aaPredicted RBP21.25■□□□□ 0.99
SPNS2-202ENST00000570641 TEPSINQ96N21 525 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 LARP6Q9BRS8 491 aaKnown RBP21.25■□□□□ 0.99
SPNS2-202ENST00000570641 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 TPCN1Q9ULQ1 816 aa21.25■□□□□ 0.99
SPNS2-202ENST00000570641 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
SPNS2-202ENST00000570641 SEC23AQ15436 765 aa21.24■□□□□ 0.99
SPNS2-202ENST00000570641 CERKLQ49MI3 558 aaPredicted RBP21.24■□□□□ 0.99
SPNS2-202ENST00000570641 NFXL1Q6ZNB6 911 aa21.24■□□□□ 0.99
SPNS2-202ENST00000570641 SGMS1Q86VZ5 419 aa21.24■□□□□ 0.99
SPNS2-202ENST00000570641 ZNF274Q96GC6 653 aaPredicted RBP21.24■□□□□ 0.99
SPNS2-202ENST00000570641 GPHNQ9NQX3 736 aaPredicted RBP21.24■□□□□ 0.99
SPNS2-202ENST00000570641 KLF18A0A0U1RQI7 1052 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 CCDC69A6NI79 296 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 FAM196BA6NMK8 535 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 POTECB2RU33 542 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
SPNS2-202ENST00000570641 SLC4A3P48751 1232 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 PPP4R3BQ5MIZ7 849 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 CHMP4CQ96CF2 233 aa21.23■□□□□ 0.99
SPNS2-202ENST00000570641 SCAF8Q9UPN6 1271 aaKnown RBP21.23■□□□□ 0.99
SPNS2-202ENST00000570641 AKR1B1P15121 316 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 MAP3K10Q02779 954 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 CUL4AQ13619 759 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 ME3Q16798 604 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 IFIT1BQ5T764 474 aaKnown RBP21.22■□□□□ 0.99
SPNS2-202ENST00000570641 DCAF15Q66K64 600 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 SYNE3Q6ZMZ3 975 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 DGKHQ86XP1 1220 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 SULF1Q8IWU6 871 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 CDAN1Q8IWY9 1227 aa21.22■□□□□ 0.99
SPNS2-202ENST00000570641 ENAHQ8N8S7 591 aaPredicted RBP21.22■□□□□ 0.99
SPNS2-202ENST00000570641 NAP1L2Q9ULW6 460 aaPredicted RBP21.22■□□□□ 0.99
SPNS2-202ENST00000570641 LARGE1O95461 756 aa21.21■□□□□ 0.99
SPNS2-202ENST00000570641 EAPPQ56P03 285 aaPredicted RBP21.21■□□□□ 0.99
SPNS2-202ENST00000570641 ANKS1AQ92625 1134 aa21.21■□□□□ 0.99
SPNS2-202ENST00000570641 SLKQ9H2G2 1235 aaPredicted RBP21.21■□□□□ 0.99
SPNS2-202ENST00000570641 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 MPHOSPH10O00566 681 aaKnown RBP21.2■□□□□ 0.98
SPNS2-202ENST00000570641 NMT2O60551 498 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 PFKFB2O60825 505 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 SLURP2P0DP57 97 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
SPNS2-202ENST00000570641 PDIA3P30101 505 aaKnown RBP21.2■□□□□ 0.98
SPNS2-202ENST00000570641 ABCB5Q2M3G0 1257 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 SUPT20HL1Q3ZLR7 823 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 CABP5Q9NP86 173 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 IL17RBQ9NRM6 502 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 BRPF3Q9ULD4 1205 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 SLC12A7Q9Y666 1083 aa21.2■□□□□ 0.98
SPNS2-202ENST00000570641 MYH4Q9Y623 1939 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 GOLGA8BA8MQT2 603 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 ZBTB43O43298 467 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 RCAN1P53805 252 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 STK3Q13188 491 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 NBPF12Q5TAG4 269 aaPredicted RBP21.19■□□□□ 0.98
SPNS2-202ENST00000570641 APOA5Q6Q788 366 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 TMEM179Q6ZVK1 233 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 MIGA2Q7L4E1 593 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 CATIPQ7Z7H3 387 aa21.19■□□□□ 0.98
SPNS2-202ENST00000570641 INTS4Q96HW7 963 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms