RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 HTRA3P83110 453 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 EPHA10Q5JZY3 1008 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 CDC37L1Q7L3B6 337 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 KRT26Q7Z3Y9 468 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 KRTAP1-3Q8IUG1 177 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 DZIP1LQ8IYY4 767 aaKnown RBP5.97□□□□□ -1.45
CNOT1-219ENST00000569882 TRMT2AQ8IZ69 625 aaKnown RBP5.97□□□□□ -1.45
CNOT1-219ENST00000569882 AGBL3Q8NEM8 1001 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 ARHGAP45Q92619 1136 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 DPF2Q92785 391 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 USP44Q9H0E7 712 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 GNL3LQ9NVN8 582 aaKnown RBP5.97□□□□□ -1.45
CNOT1-219ENST00000569882 CEP126Q9P2H0 1117 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 MKRN1Q9UHC7 482 aaKnown RBP5.97□□□□□ -1.45
CNOT1-219ENST00000569882 COL4A1P02462 1669 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 PSME4Q14997 1843 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 SCN9AQ15858 1988 aa5.97□□□□□ -1.45
CNOT1-219ENST00000569882 LTBP1Q14766 1721 aa5.96□□□□□ -1.45
CNOT1-219ENST00000569882 A0A1B0GUL6 1792 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 SRGAP3O43295 1099 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 MAN1A2O60476 641 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 UPP2O95045 317 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 CELF2O95319 508 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 GNAI2P04899 355 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 TRIM27P14373 513 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 CHAF1AQ13111 956 aaPredicted RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 PUM3Q15397 648 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 INTS6LQ5JSJ4 861 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 STRIP1Q5VSL9 837 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 KIAA0825Q8IV33 1275 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 KLHDC4Q8TBB5 520 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 TRPM4Q8TD43 1214 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 AGBL1Q96MI9 1066 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 MEIS3Q99687 375 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 CHMP4BQ9H444 224 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 CD209Q9NNX6 404 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 MYOZ2Q9NPC6 264 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 KCNQ5Q9NR82 932 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 TMPRSS4Q9NRS4 437 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 GGA3Q9NZ52 723 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 DNMT3LQ9UJW3 386 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 JAG2Q9Y219 1238 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 GPSM3Q9Y4H4 160 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 POLR2AP24928 1970 aaKnown RBP5.96□□□□□ -1.46
CNOT1-219ENST00000569882 UTYO14607 1347 aa5.96□□□□□ -1.46
CNOT1-219ENST00000569882 SHTN1A0MZ66 631 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 EYA2O00167 538 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 KLRK1P26718 216 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 ECE1P42892 770 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 GYG1P46976 350 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 G3BP1Q13283 466 aaKnown RBP eCLIP5.95□□□□□ -1.463e-7■□□□□ 9.5
CNOT1-219ENST00000569882 DLGAP5Q15398 846 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 RABL6Q3YEC7 729 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-219ENST00000569882 TMEM259Q4ZIN3 620 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 LRRC24Q50LG9 513 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 MFSD14BQ5SR56 506 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 INTS3Q68E01 1043 aaKnown RBP5.95□□□□□ -1.46
CNOT1-219ENST00000569882 Q6ZVU0 165 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 USP48Q86UV5 1035 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 C2orf69Q8N8R5 385 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 KLRG1Q96E93 195 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 GLIS2Q9BZE0 524 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-219ENST00000569882 PUS3Q9BZE2 481 aaKnown RBP5.95□□□□□ -1.46
CNOT1-219ENST00000569882 TMOD2Q9NZR1 351 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 RCAN3Q9UKA8 241 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 IQSEC3Q9UPP2 1182 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-219ENST00000569882 AKAP2Q9Y2D5 859 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 AK9Q5TCS8 1911 aa5.95□□□□□ -1.46
CNOT1-219ENST00000569882 SNAP23O00161 211 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TRAF5O00463 557 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 SASH1O94885 1247 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 PDE8BO95263 885 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 IRS1P35568 1242 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 IL15P40933 162 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-219ENST00000569882 MMP14P50281 582 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 DEFB115Q30KQ5 88 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 ANGEL2Q5VTE6 544 aaKnown RBP5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TXNRD3Q86VQ6 643 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 APOBEC3FQ8IUX4 373 aaKnown RBP5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TMEM57Q8N5G2 664 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 ANKRD44Q8N8A2 993 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TBC1D22AQ8WUA7 517 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 LPIN2Q92539 896 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TSEN34Q9BSV6 310 aaKnown RBP5.94□□□□□ -1.46
CNOT1-219ENST00000569882 MXD3Q9BW11 206 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 PGPEP1Q9NXJ5 209 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 TTF2Q9UNY4 1162 aaKnown RBP5.94□□□□□ -1.46
CNOT1-219ENST00000569882 MAST3O60307 1309 aa5.94□□□□□ -1.46
CNOT1-219ENST00000569882 WTIPA6NIX2 430 aaPredicted RBP5.93□□□□□ -1.46
CNOT1-219ENST00000569882 FIGNL2A6NMB9 653 aa5.93□□□□□ -1.46
CNOT1-219ENST00000569882 ADM5C9JUS6 153 aa5.93□□□□□ -1.46
CNOT1-219ENST00000569882 ADAM23O75077 832 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms