RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SSRP1Q08945 709 aaKnown RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 WTAPQ15007 396 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 SLC39A14Q15043 492 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 ZNF827Q17R98 1081 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 PRR5LQ6MZQ0 368 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CTR9Q6PD62 1173 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 ZSCAN30Q86W11 494 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CCAR1Q8IX12 1150 aaKnown RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CRACR2BQ8N4Y2 399 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 KCTD17Q8N5Z5 321 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CNBD1Q8NA66 436 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 MIGA1Q8NAN2 632 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 FANCBQ8NB91 859 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 KCNG4Q8TDN1 519 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 FAM163AQ96GL9 167 aaPredicted RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 PHOX2BQ99453 314 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 ALG1Q9BT22 464 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 TNMDQ9H2S6 317 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 MKRN1Q9UHC7 482 aaKnown RBP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 PCDHA7Q9UN72 937 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.25□□□□□ -1.41
SF3B3-213ENST00000569687 BOLA1Q9Y3E2 137 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 COL4A1P02462 1669 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 XDHP47989 1333 aa6.25□□□□□ -1.41
SF3B3-213ENST00000569687 COL1A1P02452 1464 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 ERICH2A1L162 156 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 GOLGA8AA7E2F4 631 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 PRPF3O43395 683 aaKnown RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TBC1D12O60347 775 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 PPP6R2O75170 966 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 NR1I2O75469 434 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 SLC3A2P08195 630 aaKnown RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 CALM1P0DP23 149 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 CALM2P0DP24 149 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 CALM3P0DP25 149 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 IL1R1P14778 569 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 KLRK1P26718 216 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 DYNLL1P63167 89 aaKnown RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TYRO3Q06418 890 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 RTN1Q16799 776 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 AXDND1Q5T1B0 1012 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 ANO1Q5XXA6 986 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 KRT40Q6A162 431 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 OTUD7BQ6GQQ9 843 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 NFXL1Q6ZNB6 911 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TXNRD3Q86VQ6 643 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 FMR1NBQ8N0W7 255 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 RNF214Q8ND24 703 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 FAM200AQ8TCP9 573 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 BICD2Q8TD16 824 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TIGD1Q96MW7 591 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 CAMKK2Q96RR4 588 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 ZSCAN10Q96SZ4 725 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 CRNKL1Q9BZJ0 848 aaKnown RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 GPCPD1Q9NPB8 672 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 DCP1AQ9NPI6 582 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TFCP2L1Q9NZI6 479 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 IQSEC3Q9UPP2 1182 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-213ENST00000569687 MRVI1Q9Y6F6 885 aa6.24□□□□□ -1.41
SF3B3-213ENST00000569687 TIAM2Q8IVF5 1701 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 KIF28PB7ZC32 967 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 USP17L12C9JPN9 530 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 USP17L21D6R901 530 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 SPTLC2O15270 562 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 RANBP6O60518 1105 aaKnown RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 DEXIO95424 95 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 TPM3P06753 285 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ME1P48163 572 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ST5P78524 1137 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 GUCY1B3Q02153 619 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 FUT2Q10981 343 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 TROAPQ12815 778 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 TRIM29Q14134 588 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 STK38Q15208 465 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 PTPAQ15257 358 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 EZH2Q15910 746 aaKnown RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 C12orf60Q5U649 245 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 SASS6Q6UVJ0 657 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC73Q6ZRK6 1079 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ZNF804AQ7Z570 1209 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 TRIM22Q8IYM9 498 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ZNF654Q8IZM8 581 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 NLGN1Q8N2Q7 840 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 FLAD1Q8NFF5 587 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 SDR42E1Q8WUS8 393 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 MRPS27Q92552 414 aaKnown RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 MAP3K14Q99558 947 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 UBAC1Q9BSL1 405 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms