RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 TNP2Q05952 138 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 PARP10Q53GL7 1025 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 KIF6Q6ZMV9 814 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 FCHSD1Q86WN1 690 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 GPC2Q8N158 579 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 RTFDC1Q9BY42 306 aaPredicted RBP7.99□□□□□ -1.13
LINC00556-201ENST00000569603 PNNQ9H307 717 aaKnown RBP7.99□□□□□ -1.13
LINC00556-201ENST00000569603 CWC22Q9HCG8 908 aaKnown RBP7.99□□□□□ -1.13
LINC00556-201ENST00000569603 PRM3Q9NNZ6 103 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 TSPYL4Q9UJ04 414 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 RNF123Q5XPI4 1314 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 MYBBP1AQ9BQG0 1328 aaKnown RBP7.99□□□□□ -1.13
LINC00556-201ENST00000569603 MAPK8IP3Q9UPT6 1336 aa7.99□□□□□ -1.13
LINC00556-201ENST00000569603 HTTP42858 3142 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 NPHP1O15259 732 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 ZNF853P0CG23 659 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 CHRNA4P43681 627 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 CHSY3Q70JA7 882 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 CD163Q86VB7 1156 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 NLRP10Q86W26 655 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC00556-201ENST00000569603 ATP6V0A2Q9Y487 856 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 ABCC4O15439 1325 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
LINC00556-201ENST00000569603 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 KHNYNO15037 678 aaKnown RBP7.97□□□□□ -1.13
LINC00556-201ENST00000569603 NEFMP07197 916 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 HOXB7P09629 217 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 HSPA1AP0DMV8 641 aaKnown RBP7.97□□□□□ -1.13
LINC00556-201ENST00000569603 HSPA1BP0DMV9 641 aaKnown RBP7.97□□□□□ -1.13
LINC00556-201ENST00000569603 EPHX2P34913 555 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 MTFR1Q15390 333 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
LINC00556-201ENST00000569603 COPS6Q7L5N1 327 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 HACL1Q9UJ83 578 aa7.97□□□□□ -1.13
LINC00556-201ENST00000569603 TNRC18O15417 2968 aaPredicted RBP7.96□□□□□ -1.13
LINC00556-201ENST00000569603 A6NJY4 79 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 RASSF10A6NK89 507 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 LMOD3Q0VAK6 560 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
LINC00556-201ENST00000569603 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 CERS3Q8IU89 383 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
LINC00556-201ENST00000569603 RUNDC1Q96C34 613 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 RBM17Q96I25 401 aaKnown RBP7.96□□□□□ -1.14
LINC00556-201ENST00000569603 ZIC5Q96T25 663 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
LINC00556-201ENST00000569603 PRKRIP1Q9H875 184 aaPredicted RBP7.96□□□□□ -1.14
LINC00556-201ENST00000569603 CHPF2Q9P2E5 772 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 SCN9AQ15858 1988 aa7.96□□□□□ -1.14
LINC00556-201ENST00000569603 CENPFP49454 3210 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 EIF2S2P20042 333 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 ADH6P28332 368 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 EPS15P42566 896 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 PPP1R42Q7Z4L9 355 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 SP8Q8IXZ3 490 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 ZDHHC3Q9NYG2 299 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 MKRN1Q9UHC7 482 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 BRPF3Q9ULD4 1205 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 PCDHGA11Q9Y5H2 935 aa7.95□□□□□ -1.14
LINC00556-201ENST00000569603 POLR2AP24928 1970 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 MKI67P46013 3256 aaKnown RBP7.95□□□□□ -1.14
LINC00556-201ENST00000569603 TMEM88BA6NKF7 163 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 CDK2AP1O14519 115 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 BBOX1O75936 387 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 FAM157BP0CG42 384 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 HCLS1P14317 486 aaPredicted RBP7.94□□□□□ -1.14
LINC00556-201ENST00000569603 CXCL9Q07325 125 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 KIAA2012Q0VF49 1180 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 SF3B3Q15393 1217 aaKnown RBP7.94□□□□□ -1.14
LINC00556-201ENST00000569603 HSP90AB3PQ58FF7 597 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
LINC00556-201ENST00000569603 CNTROBQ8N137 903 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 CCDC82Q8N4S0 544 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 JDP2Q8WYK2 163 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 SH3TC1Q8TE82 1336 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 BRCA2P51587 3418 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 ZNF646O15015 1829 aaPredicted RBP7.94□□□□□ -1.14
LINC00556-201ENST00000569603 PSME4Q14997 1843 aa7.94□□□□□ -1.14
LINC00556-201ENST00000569603 YDJCA8MPS7 323 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 PIK3R2O00459 728 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 FOXN1O15353 648 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 TXLNAP40222 546 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00556-201ENST00000569603 SEMA3FQ13275 785 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 GRAPQ13588 217 aa7.93□□□□□ -1.14
LINC00556-201ENST00000569603 AOC3Q16853 763 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms