RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 MYH2Q9UKX2 1941 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 MYL1P05976 194 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 FUT2Q10981 343 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 TBC1D9BQ66K14 1250 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
LINC00559-201ENST00000569476 KCNF1Q9H3M0 494 aa9.05□□□□□ -0.96
LINC00559-201ENST00000569476 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
LINC00559-201ENST00000569476 PLIN4Q96Q06 1357 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 TNKSO95271 1327 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 SLC26A4O43511 780 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 SMC2O95347 1197 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 BAG3O95817 575 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 IFIT1BQ5T764 474 aaKnown RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 MICU3Q86XE3 530 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 MAGEF1Q9HAY2 307 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 FBXO2Q9UK22 296 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 LAD1O00515 517 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 HELBQ8NG08 1087 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 TBC1D22AQ8WUA7 517 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 TM4SF1P30408 202 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 DIS3L2Q8IYB7 885 aaKnown RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 SPATA20Q8TB22 786 aa9.04□□□□□ -0.96
LINC00559-201ENST00000569476 CCNL1Q9UK58 526 aaPredicted RBP9.04□□□□□ -0.96
LINC00559-201ENST00000569476 KLRG2A4D1S0 409 aaPredicted RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 SARSP49591 514 aaKnown RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 MYL5Q02045 173 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 CRY2Q49AN0 593 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 CTCFLQ8NI51 663 aaPredicted RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 HOXA10P31260 410 aaPredicted RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 SHC4Q6S5L8 630 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 DRC7Q8IY82 874 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 RBM17Q96I25 401 aaKnown RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 TACC3Q9Y6A5 838 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 IL1R1P14778 569 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 TRAPPC3LQ5T215 181 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 LRRC8AQ8IWT6 810 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 ENOX1Q8TC92 643 aaKnown RBP9.03□□□□□ -0.96
LINC00559-201ENST00000569476 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
LINC00559-201ENST00000569476 CNTNAP5Q8WYK1 1306 aa9.02□□□□□ -0.96
LINC00559-201ENST00000569476 GOLGA6L9A6NEM1 432 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 WDHD1O75717 1129 aaPredicted RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 BBOX1O75936 387 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 PPP1R2P41236 205 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 MECOMQ03112 1051 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 GRM4Q14833 912 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 R3HCC1Q9Y3T6 440 aaKnown RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 UQCRHLA0A096LP55 91 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 A0A1B0GVL5 298 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 POLR3DP05423 398 aaPredicted RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 UQCRHP07919 91 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 NOVP48745 357 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 ST5P78524 1137 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 TROAPQ12815 778 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 FAM205AQ6ZU69 1335 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 CDK5RAP2Q96SN8 1893 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 PRKAB2O43741 272 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 PFKFB3Q16875 520 aaPredicted RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 AOPEPQ8N6M6 819 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 CCDC12Q8WUD4 166 aaPredicted RBP9.02□□□□□ -0.97
LINC00559-201ENST00000569476 NGLY1Q96IV0 654 aa9.02□□□□□ -0.97
LINC00559-201ENST00000569476 CTIFO43310 598 aaKnown RBP9.01□□□□□ -0.97
LINC00559-201ENST00000569476 GYG1P46976 350 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 MORC3Q14149 939 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 STK11IPQ8N1F8 1099 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 CNNM3Q8NE01 707 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 CELF1Q92879 486 aaKnown RBP9.01□□□□□ -0.97
LINC00559-201ENST00000569476 CUEDC2Q9H467 287 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 USP21Q9UK80 565 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 PTGS1P23219 599 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 FKBP1AP62942 108 aaKnown RBP9.01□□□□□ -0.97
LINC00559-201ENST00000569476 CEBPZQ03701 1054 aaKnown RBP9.01□□□□□ -0.97
LINC00559-201ENST00000569476 NCAPHQ15003 741 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 PKN1Q16512 942 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 C12orf60Q5U649 245 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 GNPATO15228 680 aa9.01□□□□□ -0.97
LINC00559-201ENST00000569476 LDHBP07195 334 aaKnown RBP9.01□□□□□ -0.97
LINC00559-201ENST00000569476 LONP1P36776 959 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms