RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	PI4K2B	Q8TCG2	481 aa		10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	COA7	Q96BR5	231 aa		10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	CRISPLD2	Q9H0B8	497 aa		10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	GNL3L	Q9NVN8	582 aa	Known RBP	10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	SLC45A1	Q9Y2W3	748 aa		10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	DDX60L	Q5H9U9	1706 aa	Known RBP	10.18	□□□□□ -0.78
TSC2-223	ENST00000568566	DDTL	A6NHG4	134 aa	Predicted RBP	10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	UQCRFS1P1	P0C7P4	283 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	SYN1	P17600	705 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	ATP5J	P18859	108 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	DYNLL1	P63167	89 aa	Known RBP	10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	TREML2	Q5T2D2	321 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	GDF15	Q99988	308 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	DDX4	Q9NQI0	724 aa	Known RBP	10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	ECHDC1	Q9NTX5	307 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	AGTPBP1	Q9UPW5	1226 aa		10.17	□□□□□ -0.78
TSC2-223	ENST00000568566	SALL1	Q9NSC2	1324 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	SEMA3E	O15041	775 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	CTNND1	O60716	968 aa	Known RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	ENTPD3	O75355	529 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	HMGCR	P04035	888 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	MAGEA10	P43363	369 aa	Predicted RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	MNX1	P50219	401 aa	Predicted RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	PDE1A	P54750	535 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	TRIM32	Q13049	653 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	PICALM	Q13492	652 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	DZIP1	Q86YF9	867 aa	Known RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	NSUN4	Q96CB9	384 aa	Known RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	HAUS7	Q99871	368 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	IDI2	Q9BXS1	227 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	RAI14	Q9P0K7	980 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	LOC285556	D6RIA3	1793 aa		10.16	□□□□□ -0.78
TSC2-223	ENST00000568566	GAK	O14976	1311 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	FAM196B	A6NMK8	535 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	IDH1	O75874	414 aa	Known RBP	10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	NEFL	P07196	543 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	MX1	P20591	662 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	BMP8B	P34820	402 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	EVX2	Q03828	476 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	FAM110C	Q1W6H9	321 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	ERICH6	Q7L0X2	663 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	LRP2BP	Q9P2M1	347 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	PNMA3	Q9UL41	463 aa		10.15	□□□□□ -0.78
TSC2-223	ENST00000568566	LAMA2	P24043	3122 aa	Known RBP	10.15	□□□□□ -0.79
TSC2-223	ENST00000568566	PDS5A	Q29RF7	1337 aa	Known RBP	10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	SMIM22	K7EJ46	135 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	ZBTB22	O15209	634 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	CAPN2	P17655	700 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	BTD	P43251	543 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	HMGCS2	P54868	508 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	GPR153	Q6NV75	609 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	MAGEB6	Q8N7X4	407 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	ANKLE1	Q8NAG6	615 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	MIGA1	Q8NAN2	632 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	CCDC136	Q96JN2	1154 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	NBPF3	Q9H094	633 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	C11orf49	Q9H6J7	331 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	PAG1	Q9NWQ8	432 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	STXBP5L	Q9Y2K9	1186 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	ATAD5	Q96QE3	1844 aa		10.14	□□□□□ -0.79
TSC2-223	ENST00000568566	RPTOR	Q8N122	1335 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	PLXNB2	O15031	1838 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	TCRBV5S4A2T	A0A5A2	114 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	GSPT1	P15170	499 aa	Known RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	PDE6A	P16499	860 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	CYP7A1	P22680	504 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	RHBDL3	P58872	404 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	MAP3K10	Q02779	954 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	SPP2	Q13103	211 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	TDH	Q8IZJ6	230 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	ZGPAT	Q8N5A5	531 aa	Known RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	TRIB2	Q92519	343 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	SEC62	Q99442	399 aa	Known RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	UBE2O	Q9C0C9	1292 aa	Known RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	HMX1	Q9NP08	348 aa	Predicted RBP	10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	PPP4R2	Q9NY27	417 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	VCAN	P13611	3396 aa		10.13	□□□□□ -0.79
TSC2-223	ENST00000568566	MROH7-TTC4	A0A0A0MT08	1334 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	PFAS	O15067	1338 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	ZNF532	Q9HCE3	1301 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	PRKAB2	O43741	272 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	PEX10	O60683	326 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	PRKAR2A	P13861	404 aa	Known RBP	10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	GCLC	P48506	637 aa	Predicted RBP	10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	LRIT3	Q3SXY7	679 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	NAA16	Q6N069	864 aa	Predicted RBP	10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	SLF2	Q8IX21	1173 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	ZNF280C	Q8ND82	737 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	MTMR10	Q9NXD2	777 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	GJD2	Q9UKL4	321 aa		10.12	□□□□□ -0.79
TSC2-223	ENST00000568566	GPR75-ASB3	A0A0A6YYF3	556 aa		10.11	□□□□□ -0.79

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